Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0652 ATGCCTACTCCTTCATCATCATCATCATCATCTTCTTCTTCTTCTTCTATTTGGGTAGTGTCTAACATAAAGCTTAAATTCTTTGCTCGTATAAGAAGGTTTCTTCACTCCAAAGCAGCCCGAAAGCGTTGCTGTGATCCCTCTGATCATATTGACAAAGAAAAAAGCACAGTTGAACCCAAAAACAAGGTTGAAAACCTTGAAACGGTTCAAGTTATGGAGAAGAATGTAGAGGAAGAGGAGGAATCTGAAATCGTGTTGCAAAGGAGTGTGAAGAAGCTTCACTTTGGAAGCTGTGAAGAGAAGGAGGTGGCAGCAAAAGAGATTGCAAGGTTAGCTAAAGAAGATGTTAAGGTTAGAAAGTTGATAACTGAACTTGGGGTGGTGCCGGTGTTGGTGTCTATGGCGGTGTCTGAGGTGGCTAGCCGCCGGAGATTAGGGTTGATGGCGCTCATCCACCTAGCTGATGGAACTTACACGAACAAGGTTTTGATTGTGGAGGCAGGAATACTGTTGAAGCTACCAAAGAAAATTGACCTTTTAGATGAATCAACAATAAGTGCATTTGCAGAATTGCTCTTAACATTATCATCTCTAGCAAATACCCAATTCTCTTTTCCTTCATTAGATTTTCTCCCATTACTAAGAAACATTCTTGATTCAAGTTCATGTTTTGATACCAAAAGATCATGTTTATGTGCCTTATACAACATCTCAACAGTGTTAGAGAATGCAAGAGTTTTGGTTTCTAGTGGAGTTGTGCCTATTCTCTTGGAACTCTCCACAATGAAGGAAATTTCAGAGAAAGCACTAGCTACTCTAGGGAACTTGTTGGTAACTTTGATGGGAAAGAAAGCAATAGAGAATAGTTCAATGGTGCCAGAAAGTTTCATTAAGATATTGTTATGGGAAGATAAACCAAAATGTCAAGAGTTGTGTGTTTATATTTTGATGATTTTGGCTCACCAAAGTTCATCACAAAGAGAGAAAATGGCACAGGCTGGGATTGTTCCTGTGCTTCTAGAAGTGGTTCTATTAGGAAGCTCTTTAGCTCAGAAGAGAGGAATGAAACTTTTGCAATGGTTTAAGGATGAAGGGCAAGTAAGGATGGGGCCACATTCAGGTCCACAATCACCAAGATTTGCAATGGGCTCACCTATAAATCAAGGAGATGCAAAAAAGGGGAAGAAATTGATGAAGGGTTTGGTGAAACAAAGTTTGCATAGGAATTTGGAAATAATAACACAGAGGGCAAATGCAACTGGAGATTCTTCTAAACTCAAGTCATTGGTGATCAGCACAAGTTCCAAGAGTTTGCCGTACTAG 1326 0.3982 MPTPSSSSSSSSSSSSIWVVSNIKLKFFARIRRFLHSKAARKRCCDPSDHIDKEKSTVEPKNKVENLETVQVMEKNVEEEEESEIVLQRSVKKLHFGSCEEKEVAAKEIARLAKEDVKVRKLITELGVVPVLVSMAVSEVASRRRLGLMALIHLADGTYTNKVLIVEAGILLKLPKKIDLLDESTISAFAELLLTLSSLANTQFSFPSLDFLPLLRNILDSSSCFDTKRSCLCALYNISTVLENARVLVSSGVVPILLELSTMKEISEKALATLGNLLVTLMGKKAIENSSMVPESFIKILLWEDKPKCQELCVYILMILAHQSSSQREKMAQAGIVPVLLEVVLLGSSLAQKRGMKLLQWFKDEGQVRMGPHSGPQSPRFAMGSPINQGDAKKGKKLMKGLVKQSLHRNLEIITQRANATGDSSKLKSLVISTSSKSLPY* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0652 441 Gene3D - 61 376 IPR011989 -
Lan4g0652 441 SUPERFAMILY ARM repeat 93 352 IPR016024 -
Lan4g0652 441 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 78 441 - -
Lan4g0652 441 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 78 441 - -
Lan4g0652 441 SMART arm_5 241 279 IPR000225 GO:0005515
Lan4g0652 441 SMART arm_5 173 240 IPR000225 GO:0005515
Lan4g0652 441 SMART arm_5 116 156 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0652 Lan-Chr4 9102413 9106080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0652 100 379 U-box Gene Family AT1G67530 31.707 3.33e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0652 - - gmx:100819002 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0652 4 9102413 9106080 Lan19g0880 19 16275050 16277659 LSH