Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0645 ATGGTACTTTTTCCATCTTTTGTGAATGGATTGGTGAGAAGTGTGTCATTGAAGAAAGAGAAGAGATATAAAAAGAATGATGGAAGGAAAGAAGTGGAAGCATTGGCAAAGGAAGCAAGGAAGAATGAACTGTTGTTGAGTTCATCTGGAATTGTTAAATCAGCCAAGGCCAACAATTTTGCCTCTGTTTTCACTAGCAAGGGCCAGAAAGGAGTCAATCAGGATCGCCTTGTTGTTTGGGAGGAATTTGGCTGCCAAGAAGACATGATCTTCTGTGGAATATTTGATGGGCATGGCCCTTGGGGACACTTTGTGGCCAAAAGGGTCAGGAAACTAGTACCAGCTTCTTTACTAAGCAACTGGCAAGAAAATCTGGCTGCAACATCACTTGACTTGGATTTTAAGATGGAAGAAGACAAAAATCTCCATAGATTTGACATATGGAAGCAATCCTACATAAAAACTTGTGCCTCTGTTGATGAGGATCTAAAGCAGCATAGTGGAATTGATGCCTTTCAAAGTGGTTCTACAGCTTTGACAATTATCAAACAGGGTGAACATCTGATTATAGCAAATGTGGGTGATTCAAGGGCTGTTTTGGCAACAACTTCAATGGATGGCACATTAACTTCTCTTCAGCTTACAACTGATATGAAACCAAACTTACCAAAAGAAGCAGAACGCATAATGCAATCAAGAGGGCGTGTATTTTGTTTGGAAGATGAACCTGGAGTGTATAGGGTGTGGATGCCAAATGGTAAAACTCCAGGGTTAGCATTATCAAGAGCATTTGGTGATTACTGTGTAAAGGACTTTGGACTAATATCTGTGCCTGATGTGACACAAAGAAAACTCACCACTAATGACCAATTTCTTATCTTAGCATCAGATGGGGTATGGGATGTTATTTCCAATGAAGAAGCAGTGAAGATTGTTTCATCAACACTACATAAAGAGAAAGCAGCCAAAAAGCTAGTGAAATGGGCCATGCATGAATGGAAACGTAAGAAAAGAGGCATTGCTATTGATGATATATCAGTTATTTGTCTCTTCTTTAACTCTCCCTCCACTCATAAACTCCATAGGAATAAGAATGGTGGATGA 1104 0.3976 MVLFPSFVNGLVRSVSLKKEKRYKKNDGRKEVEALAKEARKNELLLSSSGIVKSAKANNFASVFTSKGQKGVNQDRLVVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRKLVPASLLSNWQENLAATSLDLDFKMEEDKNLHRFDIWKQSYIKTCASVDEDLKQHSGIDAFQSGSTALTIIKQGEHLIIANVGDSRAVLATTSMDGTLTSLQLTTDMKPNLPKEAERIMQSRGRVFCLEDEPGVYRVWMPNGKTPGLALSRAFGDYCVKDFGLISVPDVTQRKLTTNDQFLILASDGVWDVISNEEAVKIVSSTLHKEKAAKKLVKWAMHEWKRKKRGIAIDDISVICLFFNSPSTHKLHRNKNGG* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0645 367 Gene3D - 47 354 IPR036457 -
Lan4g0645 367 CDD PP2Cc 59 352 IPR001932 -
Lan4g0645 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Lan4g0645 367 Pfam Protein phosphatase 2C 85 331 IPR001932 -
Lan4g0645 367 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 362 - -
Lan4g0645 367 SUPERFAMILY PP2C-like 56 354 IPR036457 -
Lan4g0645 367 SMART PP2C_4 51 350 IPR001932 -
Lan4g0645 367 PANTHER ALPHABET, ISOFORM E-RELATED 1 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0645 Lan-Chr4 8762569 8765110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0645 1 353 PP2C-type Phosphatase Gene Family AT3G05640 59.718 5.02e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0645 - - gmx:100814087 614.379