Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0637 ATGCAAGGTTCTCGCGTCCAACGACCAAGAGTTGCAGAAGTTCAGAGATGGAACGTTGTGCAACCACAGAGAAGGTGTTTGGAGTGTGGAGCTACTAGTACCCCTCTCTGGAGAAGTGGTCCAAGCGGGATGAATACACTTTGTAACGCTTGTGGGCTAAGATTTAAGAACAAATCAAAAGCTAAGGATCCAAACAAGAAGATCAACAACAATATCATCAAGAAGGGAAAAAGAAGGACTAAGAATGGCAATGGGGTTAACTTGGAGAAGAAATTGATGGGTTTGGTGAACCAGGTTTTCAGTCATAGACCACCAAAGGAGAGGCGTTGGAAGAGGCTTACCGAAGAGGAACAAGTTGCGGTGCTTCTAATGTCTTTGAATGCTTAA 387 0.4419 MQGSRVQRPRVAEVQRWNVVQPQRRCLECGATSTPLWRSGPSGMNTLCNACGLRFKNKSKAKDPNKKINNNIIKKGKRRTKNGNGVNLEKKLMGLVNQVFSHRPPKERRWKRLTEEEQVAVLLMSLNA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0637 128 Pfam GATA zinc finger 26 59 IPR000679 GO:0006355|GO:0043565
Lan4g0637 128 ProSiteProfiles GATA-type zinc finger domain profile. 20 75 IPR000679 GO:0006355|GO:0043565
Lan4g0637 128 Gene3D - 18 88 IPR013088 GO:0006355|GO:0008270
Lan4g0637 128 SMART GATA_3 20 81 IPR000679 GO:0006355|GO:0043565
Lan4g0637 128 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 22 66 - -
Lan4g0637 128 ProSitePatterns GATA-type zinc finger domain. 26 51 IPR000679 GO:0006355|GO:0043565
Lan4g0637 128 PANTHER OS01G0976800 PROTEIN 19 126 - -
Lan4g0637 128 CDD ZnF_GATA 25 58 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0637 Lan-Chr4 8713354 8714541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0637 18 127 C2C2-Gata Transcription Factor Family AT5G49300 38.739 8.72e-18 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan4g0637 GATA 8.1e-15 CL0167