Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0606 ATGTGCAGCATCTTTGTTTCAACCATGGACAATTACCAAGGTGATTTAACTGACATAGTTCGTGCTAGTAGTGGTGGAGCATATAGCACCAGCAGCACAACTTCTTCTTCATCATCAAAAGCTGCAACTAATAATCAATTTTCTCATCATCACTGGCAGCACCAGCACCATTTTTCTTCTGATCCTATCAACTTCTCTTCTTCTGTTTTGGAAGGAGGCACCAACTTTGGCGATCCATTCTCAACTTTATTGAGAGATCCATTATCAACTATGAGAGTCCCCTTCTTACATGAGCTTGATGTTATGCCTAATTCAGTGAATAATTCTTCACCCTACTTCAACAGTACCACTACATTTACAGCAACAACTTCTTCTGCTGAAAATATCATAAGCACTTCCTGTGGTGCTTTGGAAGATGCAGCACCTGCAGCTGCTAGTTTTGGTGCTAGTACTATTACTAATACTAATAGTGCTGCTTCTATTTTTGCACACAAAATTCTTGAAGATGATAACATCATGAGATCTTCAAGGCCTTCTTCTAAGAGCATATTCTCAAACATGATTCAAATATCTCCAAATGCTGCAAAGATACCTCTCTTGCCATATGATCCTACTTCTTCGGTAATGGGTGCTTCTGCAATGGTTTCAGGCAACATGATTAATGCAACAAACACCTCCAAGGATTGCCTTGTTGACAACACAGGAGGAGTGCAGATCTCATCTCCACGGAATCCGGGTCTTAAAAGAAGGAAGAACCAGGCGAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAATAGCAGACAAACTGGAGAAGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATACGGTCAAAAACCCATCAAAGGTTCACCCTATCCAAGGGGTTATTATAGATGCAGCAGCTCAAAGGGTTGTTCAGCAAGGAAACAAGTTGAGAGGAGCAGAACAGACCCAAATATGTTGGTCATTACTTACACTTCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTTGCCGGTTCATCAAGATCCCAACCATCCAAAAACAACACCAACAACAACAATGCTTCAACTTCAAAGAACTCAGAAACCTCTCACAAGGGCACAACAGCAACAACAAAGCCAAAGGAAGAGGAGCAAGAGAGCAACAATAGTGAAGGCAATGTGTCAGTGAAGGAAGAGATAGAAATGGAAGACATAGAGAAGCAACTTGAGATGGATGATGTTGAATTCAGTGATGGACTATCTTACAAGCCATCTATGTTGGAGAATAGTAGCAACAATAGTCAATCTCATGAGGATTTCTTTGCAGAGTTGGGTGAAATAGAAGCTGACCCACTAGACCTATTGTTTACTCAAGATTTTATTGATCAGAGGGAATCCAAGGCCTTAGATCCATTCCATCTCTTTCATTGGTCAGGAGGAGGCACCAACAACAACAACACCAACAACTCTTTTGAAGAATCTAGTAATAGTAAGAGAAAGTTATAA 1506 0.4104 MCSIFVSTMDNYQGDLTDIVRASSGGAYSTSSTTSSSSSKAATNNQFSHHHWQHQHHFSSDPINFSSSVLEGGTNFGDPFSTLLRDPLSTMRVPFLHELDVMPNSVNNSSPYFNSTTTFTATTSSAENIISTSCGALEDAAPAAASFGASTITNTNSAASIFAHKILEDDNIMRSSRPSSKSIFSNMIQISPNAAKIPLLPYDPTSSVMGASAMVSGNMINATNTSKDCLVDNTGGVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSSRSQPSKNNTNNNNASTSKNSETSHKGTTATTKPKEEEQESNNSEGNVSVKEEIEMEDIEKQLEMDDVEFSDGLSYKPSMLENSSNNSQSHEDFFAELGEIEADPLDLLFTQDFIDQRESKALDPFHLFHWSGGGTNNNNTNNSFEESSNSKRKL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0606 501 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 13 479 - -
Lan4g0606 501 SUPERFAMILY WRKY DNA-binding domain 274 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan4g0606 501 MobiDBLite consensus disorder prediction 27 46 - -
Lan4g0606 501 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 479 IPR044810 GO:0003700
Lan4g0606 501 MobiDBLite consensus disorder prediction 478 494 - -
Lan4g0606 501 SMART WRKY_cls 276 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan4g0606 501 MobiDBLite consensus disorder prediction 320 374 - -
Lan4g0606 501 MobiDBLite consensus disorder prediction 301 399 - -
Lan4g0606 501 MobiDBLite consensus disorder prediction 478 501 - -
Lan4g0606 501 Pfam WRKY DNA -binding domain 278 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan4g0606 501 Gene3D WRKY domain 250 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan4g0606 501 ProSiteProfiles WRKY domain profile. 271 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0606 Lan-Chr4 8468424 8472198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0606 1 487 WRKY Transcription Factor Family AT2G34830 40.079 1.88e-85 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan4g0606 WRKY 2.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0606 - - aprc:113852911 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0606 4 8468424 8472198 Lan19g0798 19 14469554 14473592 LSH
Lan4g0606 4 8468424 8472198 Lan16g0243 16 1948752 1954454 LSH