Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0590 ATGCTGTTAGTGAATTCTGCTGAAGTCTACATTGTGCTAAAAGAAGTGGTTTTGAAGACAATGAAGCTCTTTAGCCTTTTAGTGTTATCCTTATCTTTCTTCTCAGTTACGGGGCAGCTACATTCCCGGGACATATTAGCATTGCTGGAATTTAAGAAAGGTGTCAAGCATGACCCTACTGGTTATGTCCTCAATTCTTGGAATGAGGAATCCGTCGACTTTGATGGATGCCCATCTTCATGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCTTGGGTTGTCCTTGATAACCTAGGTCTCTCGGCCGAAGCTGATTTGAGTGTTTTTTCTAACCTCACAAAGCTTGTGAAACTCTCCATGTCCAACAATTCCATATCGGGAAAGCTACCTGACAACATTGGTGATTTCAAAAGCCTTCAATTCATGGATATTTCCAATAACCTCTTTTCTTCTTCCTTACCATCGGGAATTGGTAACTTAGGTAGCTTGCAGAATCTGTCATTGGCTGGAAACAGCTTCTCTGGCCTAATTCCTGAATCCATTTCGAAAATGGCTTCTATCAAGTCTTTGGACTTGAGCCGCAACTCCTTTTCCGGAGCACTGCTAGCATCATTGACTAAGCTGAAAAGCCTGGTATCTCTTAACTTGTCTCATAACAGATTAACTGGAAATATTCCCAAAGGTTTTGAGCTAATGTCTGCTCTTGAAAAACTTGACTTGCATGGGAATATGCTTGATGGTCATTTAGATGCTGAATTTATTCTTTTATCAAGTGCCAGCTATGTTGATTTCAGTGACAATGGGCTAGATAGTTCTGATTCCGAGAGGAAGAAATTTCTACCGCGAATATCTGAAAGTATTAAGCATCTGAATCTAAGCCACAACCTACTCACTGGGACATTGGTCAGTGGAGCCGAGCAACCAGTTTTTGAAAATTTGAAGGTGTTAGACCTCAGCTACAATAAACTGGATGGAGAATTGCCTGGATTTGATTTTATTTATGATCTCCAAGTCCTTAAGCTTAGCAATAACAGATTTTCAGGATTTATTCCTAACGGCCTACTAAAAGGAGACTCTTTGGTTTTAACCGAACTCGATTTGAGTGCCAACAATCTCTCAGGGCCACTAAGTATAATTACATCAACTACTTTGCATTTTCTTAATCTCTCATCAAATGGATTCACCGGTGACCTGCCACTGCTGACCGGAAGCTGTGCTGTACTTGATCTGTCAAACAACAAATTTGAAGGAAATTTGACCAGGATGGTGAAATGGGGGAACATAGAATATCTCGATCTCAGTGTAAATCATTTAACAGGGATCATCCCTGAAGCAACTCCTCAGTTTTTGAGATTGAATTATTTGAATCTATCACATAATTCTCTTAGCAGCTCCCTCCCAAGAGTCTTAACACAGTATCCAAAGCTTAAAGTGCTTGACATTAGTTCCAACCAGTTAGATGGACTACTTCTAGCTGATCTGCTCGCAATGCCTACTTTGCAAGAGCTCCACCTGGAAAATAATATGATCTCCGGCAGCATTAATTTATCATCTAATGTTCATTCTGATCTGCAGATTCTTGATCTTTCTCATAATCGGTTTAATGGCTATTTTCCTGATCAGTTTGGGTCAATAACTGGCATGAAAGTTCTCAATATTGCTGGAAATAATTTTTCCGGTTCTCTTCCAACCACCATTTCTGATATGATTTCTCTAGAATCCTTGGATATATCAGAGAATCACTTCACCGGTCCTCTACCAAATAACATGCCGAAGGGGCTCAATAACTTTAACGCTTCTCAAAATGATCTGTCTGGAGTTGTCCCGGAAGATCTTAGAAAGTTCCCTAGTTCTTCTTTCTTTCCAGGGAATGCTAAATTACATTTTCCAAATGGTCCTTCTGGATCAACCACTTCACCACGTGAAAATTCCAAGAGGAAGCCTATGAGCACTATCATTAAAGTAATCATTATAGTGTCATGTGTGGTTGCTCTCTTCATTTTAATCTTGCTTGTTATCTTCATACACTTCATACGTATATCAAGATCTTCACCAGAATATGATACAAGTAAGGATATCCATGGGCGTACTGAACCAATCATCTCTGGTCCTGTCCCCGTTCGTACATCAGAAAGGGGTGGTGCTTTGGTTGTATCAGCTGAGGACCTCATGACATCACGTAAAGGATCGCCATCAAAGGCAATCAGCCCCGATGAAAAAATGGCAGCTGTAACCGGTTTCTCCCCATCTAAAGCCAGCCACTTTTCGTGGTCACCAGAGTCCGGTGATTCATTTGCTGCTGAAAATCTTTCAAGGCTAGACACAAGATCCCCGGATAGGTTGATAGGAGAGCTGCATTTTCTTGATGATACAATAGCATTGACACCTGAGGAGCTGTCAAGGGCTCCAGCTGAAGTTTTGGGAAGAAGCAGCCATGGTACTTCATACAAAGCTACTCTGGACAGTGGTTTATTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTAGCGAAACAGAGAAAAGAATTTGTTAAAGAGATTAAGAAATTTGCAAACATTAGGCATCCTAATGTTGTGGGATTAAGAGGATACTATTGGGGTCCTACACAGCACGAGAAGCTTATTCTTTCAGATTATATCTCACCGGGAAGTCTTGCAAGTTCTCTTTACGATCGACCAGGAAGAAAAGGTCCACCATTAACTTGGGCTCAGAGGCTCAAAATAGCAGTTGATGTAGCGCGTGGCCTGAACTATCTCCATTTTGATCGTGCTGTTCCTCACGGGAACCTCAAAGCTACTAACGTGTTACTAGATACAGCTGATATGAATGCACGTGTTGCTGATTACTGCCTTCATCGACTTATGACTCAGGCCGGTACCATTGAACAGATTAATGATGCCGGGGTGTTGGGTTATCGTGCACCAGAGTTAGCCGCTTCCAAGAAGCCAACGCCCTCCTTCAAATCAGATGTTTATGCTTTTGGAGTGATACTTTTGGAACTTTTAACTGGAAGGTGTGCTGGTGATGTGATATTTAGCGATGAAGGAGGTGTTGATCTGACAGATTGGATAAGGTTGCGGGTAGCAGAAGGTCGAGGCTCAGAATGTTTTGATACTACATTGATGCCAGAAATTAGTAATACTGCTGTTGAAAAGGGAATGAAGGAGGTCCTAGGTATAGCCATTCGATGCATTCGATCTGTTTCCGAAAGACCGGGAATCAAGACTATATATGAAGATCTTTCTTCAATATAG 3255 0.4144 MLLVNSAEVYIVLKEVVLKTMKLFSLLVLSLSFFSVTGQLHSRDILALLEFKKGVKHDPTGYVLNSWNEESVDFDGCPSSWNGVLCNGGNVAWVVLDNLGLSAEADLSVFSNLTKLVKLSMSNNSISGKLPDNIGDFKSLQFMDISNNLFSSSLPSGIGNLGSLQNLSLAGNSFSGLIPESISKMASIKSLDLSRNSFSGALLASLTKLKSLVSLNLSHNRLTGNIPKGFELMSALEKLDLHGNMLDGHLDAEFILLSSASYVDFSDNGLDSSDSERKKFLPRISESIKHLNLSHNLLTGTLVSGAEQPVFENLKVLDLSYNKLDGELPGFDFIYDLQVLKLSNNRFSGFIPNGLLKGDSLVLTELDLSANNLSGPLSIITSTTLHFLNLSSNGFTGDLPLLTGSCAVLDLSNNKFEGNLTRMVKWGNIEYLDLSVNHLTGIIPEATPQFLRLNYLNLSHNSLSSSLPRVLTQYPKLKVLDISSNQLDGLLLADLLAMPTLQELHLENNMISGSINLSSNVHSDLQILDLSHNRFNGYFPDQFGSITGMKVLNIAGNNFSGSLPTTISDMISLESLDISENHFTGPLPNNMPKGLNNFNASQNDLSGVVPEDLRKFPSSSFFPGNAKLHFPNGPSGSTTSPRENSKRKPMSTIIKVIIIVSCVVALFILILLVIFIHFIRISRSSPEYDTSKDIHGRTEPIISGPVPVRTSERGGALVVSAEDLMTSRKGSPSKAISPDEKMAAVTGFSPSKASHFSWSPESGDSFAAENLSRLDTRSPDRLIGELHFLDDTIALTPEELSRAPAEVLGRSSHGTSYKATLDSGLLLRVKWLREGVAKQRKEFVKEIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASSLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVADYCLHRLMTQAGTIEQINDAGVLGYRAPELAASKKPTPSFKSDVYAFGVILLELLTGRCAGDVIFSDEGGVDLTDWIRLRVAEGRGSECFDTTLMPEISNTAVEKGMKEVLGIAIRCIRSVSERPGIKTIYEDLSSI* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0590 1084 ProSiteProfiles Leucine-rich repeat profile. 211 233 IPR001611 GO:0005515
Lan4g0590 1084 SUPERFAMILY RNI-like 118 605 - -
Lan4g0590 1084 ProSiteProfiles Leucine-rich repeat profile. 313 335 IPR001611 GO:0005515
Lan4g0590 1084 Gene3D Transferase(Phosphotransferase) domain 1 881 1084 - -
Lan4g0590 1084 SMART LRR_typ_2 450 473 IPR003591 -
Lan4g0590 1084 SMART LRR_typ_2 113 137 IPR003591 -
Lan4g0590 1084 SMART LRR_typ_2 209 232 IPR003591 -
Lan4g0590 1084 SMART LRR_typ_2 570 594 IPR003591 -
Lan4g0590 1084 SMART LRR_typ_2 233 257 IPR003591 -
Lan4g0590 1084 SMART LRR_typ_2 311 333 IPR003591 -
Lan4g0590 1084 SMART LRR_typ_2 161 184 IPR003591 -
Lan4g0590 1084 SMART LRR_typ_2 334 358 IPR003591 -
Lan4g0590 1084 PANTHER OS07G0626500 PROTEIN 26 1084 - -
Lan4g0590 1084 ProSiteProfiles Protein kinase domain profile. 802 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0590 1084 Pfam Protein tyrosine and serine/threonine kinase 806 1003 IPR001245 GO:0004672|GO:0006468
Lan4g0590 1084 SUPERFAMILY Protein kinase-like (PK-like) 805 1081 IPR011009 -
Lan4g0590 1084 Gene3D Ribonuclease Inhibitor 42 202 IPR032675 -
Lan4g0590 1084 Pfam Leucine Rich repeat 313 327 IPR001611 GO:0005515
Lan4g0590 1084 PANTHER - 26 1084 - -
Lan4g0590 1084 Gene3D Ribonuclease Inhibitor 281 638 IPR032675 -
Lan4g0590 1084 SUPERFAMILY RNI-like 262 419 - -
Lan4g0590 1084 MobiDBLite consensus disorder prediction 631 646 - -
Lan4g0590 1084 Pfam Leucine rich repeat 525 583 IPR001611 GO:0005515
Lan4g0590 1084 Pfam Leucine rich repeat 428 487 IPR001611 GO:0005515
Lan4g0590 1084 Pfam Leucine rich repeat N-terminal domain 42 87 IPR013210 -
Lan4g0590 1084 Gene3D Phosphorylase Kinase; domain 1 795 879 - -
Lan4g0590 1084 MobiDBLite consensus disorder prediction 624 646 - -
Lan4g0590 1084 Gene3D Ribonuclease Inhibitor 203 280 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0590 Lan-Chr4 8268884 8273917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0590 21 1072 Receptor kinase-like Gene Family AT1G55610 26.831 1.14e-79 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan4g0590 PK_Tyr_Ser-Thr 5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0590 - - gmx:100793639 1741.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0590 4 8268884 8273917 Lan19g0782 19 14232797 14244235 LSH
Lan4g0590 4 8268884 8273917 Lan16g0273 16 2164173 2169272 LSH