Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0580 ATGAAAGAAGGGATGAGTGGTAGGAAGCATGGTGCAGTTACACCATGTGCTGCATGCAAGCTTCTAAGGAGAAAGTGTGGCCAAGATTGTGTTTTTGCTCCTTATTTCCCAGCTAATGAACCCCACAAGTTTGCAAATGTGCACAAAGTATTTGGTGCTAGCAATGTTAACAAGATGCTTCAGGACCTACCCATGCATCAAAGAGGGGATGCAGTGAGCAGCATGGTGTATGAGGCCAATGCCAGAGTCAGAGACCCTGTTTATGGCTGTGTAGGAACCATCTCTTCTCTTCAGCAACATATTCATATGCTTCAGACCCAATTGGCCCAGGCCCAAGCTGAGGTGGTCCACCTAAAGGCCCGTCAAACTAGATGTAATTCCAATCTTGGGCTTTCCCCTAATAGCCCAACTAATAGTTGCTCTCCATCATCCAAGATCATGGGCTCCTATGCAAAGCCCATTTTTGATATGGACATGGTGGTGGACCATGCTATCTATAGTGATTCAATATGGTCATGA 519 0.4586 MKEGMSGRKHGAVTPCAACKLLRRKCGQDCVFAPYFPANEPHKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGTISSLQQHIHMLQTQLAQAQAEVVHLKARQTRCNSNLGLSPNSPTNSCSPSSKIMGSYAKPIFDMDMVVDHAIYSDSIWS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0580 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 152 - -
Lan4g0580 172 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Lan4g0580 172 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
Lan4g0580 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 6 152 - -
Lan4g0580 172 Coils Coil 94 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0580 Lan-Chr4 8176096 8177713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0580 1 172 AS2 family AT1G31320 68.786 1.29e-66 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan4g0580 LOB 5.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0580 - - tcc:18596365 267.314