Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0547 ATGGATGAACAATTGGGATTGCTTAAAGTCACAGTTGTACAAGGGAAGAGGTTAGTTATCAGAGATTTCAAGAGCAGTGATCCTTATGTTGGGCTCAAAGTAGGAAATCAGACAGCAAAAACCAAAGTCATTAATAGCTGTTTGAATCCTGTTTGGAATGAGGAGATGAATTTCACACCAACAGAACCCTTGGTAGTTCTGAATTTGGAAGTATTTGATAAAGATCTTTTGAAGGCAGATGATAAGATGGGAAATGCTTTCCTAAACCTTCAACCATTGGTTTCAGCAGCAAGATTAAGGGATATTTTAAGAGTCTCCTCTGGTGAAACTACATTAAGGAAGGTCATTCCGGAAAGTGACAATTGTCTAGTCCGCGAAAGCAGCATCAATTGCGTAAATGGCGAAGTTGTGCAGAATGTTTGGTTACGGCTTCGCGGAGTTGAGTCCGGGGAGGTAGAGTTGATAGTCAAGCTGATCACACTCCCTCAAAGTAGTGCACAAATTGCAACAAGATCTTTCAAGTAA 525 0.4057 MDEQLGLLKVTVVQGKRLVIRDFKSSDPYVGLKVGNQTAKTKVINSCLNPVWNEEMNFTPTEPLVVLNLEVFDKDLLKADDKMGNAFLNLQPLVSAARLRDILRVSSGETTLRKVIPESDNCLVRESSINCVNGEVVQNVWLRLRGVESGEVELIVKLITLPQSSAQIATRSFK* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0547 174 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lan4g0547 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 163 - -
Lan4g0547 174 SMART C2_3c 7 102 IPR000008 -
Lan4g0547 174 PRINTS C2 domain signature 22 34 IPR000008 -
Lan4g0547 174 PRINTS C2 domain signature 46 59 IPR000008 -
Lan4g0547 174 PRINTS C2 domain signature 67 75 IPR000008 -
Lan4g0547 174 CDD C2_ArfGAP 5 150 - -
Lan4g0547 174 Pfam C2 domain 6 99 IPR000008 -
Lan4g0547 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Lan4g0547 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 159 IPR035892 -
Lan4g0547 174 Gene3D C2 domain 3 171 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0547 Lan-Chr4 7950712 7953798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0547 1 163 C2H2 Transcription Factor Family AT4G21160 42.331 3.53e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0547 - - gmx:100779624 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0547 4 7950712 7953798 Lan19g0734 19 13756678 13759546 LSH