Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0535 ATGTCTGAGGATATTGCACCTGTTTTTGTGGACTGGGAAGAGCAAGTGATATGTCCTGAGCGTGGGAACCGTGCAACTCATTTTTACTTGAAAGATGCATTTGGGAATTCGGTGCTTGCTGTTGTTGGGACTGAGAGAAGTGTGAGGCACATGATGTATATTGTACCTGACAATTTTATGAAGGTTTATGGATCCAATGAGTCTATCAATGCATTTAAATGGAGGGCGAGGAGGGAGGTTGTCAACTGGCTCACTTGTTTGATTTCGCAGAATCATTCACAACGTGCGGGTGTTCAGCTGAATGATTCAGAACAAGCTGCAGAATCTCTCGAGCTATTAAAAGCTGGAATCCATGCTAAGAAAAAGCTTTTGCCTGATAAATTGATTTCAAGGAAATTGGAACTTCAAAGGTCAAATATTGAGTGGTTGGGCATTGCTTGGTTTTGTCATAAACAGCTGAAGCACTACCCAGGGTTTTGCAGAAATAGGACAATCATAAATGTTCATTCGTTTGTATATATCATGGCTCAAGAAGAAAGAAACTATCTTGGTTATGTGGAAGATATGTATGAAAACAAGAAGAGCCAGAAAAAGGTGAAGGTACGGTGGTTTCACCATGGTCAGGAAGTTAAGCATGTGATTCCAGAGCTGAATCCACAAGAGGGAGAAGTTTTCATCACGCCTCATGTTCAGGTGATCAGTGCAGAGTGTGTCAGCGGTCCTGCAACAGTTTTGAATCCCAAGCATTATGAGAAATACCTGGCTGATGTGCCACACATCTCTTTATCTGAGGTCCATGTATGCTCTAGGCAGTTCAAAAACAACAAGCTTAAACCCTTCTCACTTACTAAGTTGCGTGGATATAGTAACCAACCTGTGCCTTCTTGTTTGTATAGTCCTATTTTGTCCAAGAGAAAGACCAATTGTCTTAAATCAAACATGGAAGATGATGAGGACTTCACTCAAGATGATCCTTTAATGTCCAGCAGTAAGAGGAAGAGGAGTTCTAAGGGGAATCAAGTGCTTGAAAATGGTTCTTATGATCTGAAAAACTCTGCTCCTTTGAATGAGATGACAAAATGTGAACCGAAATACCCAAGTTTGAAATTGAAACTATCAAAAACAACAATGGGTATTAAGGTTATTGGACCCAAGCCTCAGTGTGAACTGTCTTTTATGGTAGATGAAAAAGTAGAGGTTCTCTGTCAAGATAGTAGCATTAGAGGATGCTGGTTTCGGTGTAAAATCTTGACTGCAACTCAGAAGCGACTGAAGGTCCAATATGATGACGTGCTGGATGTAGATGGACCCGAGAAGCTAGAGGAATGGATCCCTGCATCTAAAGTGGCAGCTCCTGACAAACTGGGTATGCGATGTTCAGGCCGATTAGCAGTACGACCATGCCCTCCTGAAAATACTACAGATGATACTTTTGAGATTGGAGCAGCAGTGGATGCCTGGTGGAGTGATGGATGGTGGGAAGGTGTTGTAACTGCTGTCAATTTTTGTGGAGTTGGAATCCTGCAGGTTTATTCTCCTGGTGAAGACAAGTTCCTAACAGTTGAGAAGAGGAACGTTCGGATTTCGCGAGATTGGGTTGGTAAGAAGTGGGTTGACATACCGGGAAAGCCTAACATTTGCAGCTATATATCTCTAAATGTCAGTTCCAGCATCAGACTGACAGCTGATTCTGCAGTGGTAGATGGATCCATATCTGATTTAGAAAGTAAACCATCATCAGTTCCCAAAGTTGAAGTTGCTCAAAAGATTGAGCCTGAATTGTCTGTTTCGGAAGCACCTGATGACCCGGTAGAAACTATGAAGGGAATGACCTTGAGGAAGCCACTCCATGCCATTCATGAAGGCATAGATTATAACTGTGATGGTGGCTGTGATGGTGACGACGACATTGTTGATGCTGATATGAAGCTACTCTGTGCCATTGATGTAGACAAGGATAATAACTCTGGTGGTGGCAGTGCAAGTGACACTGGCATTGATGATGGTCGTGGTGGTGATGACGCTCAAGAGACAAGTGAGGGAATTTTGAAGGAGGAAAATTTTGATTCTGCTGAACCAAAACTTGATGCAGCAGAAGCAATACAGGTTGCATGA 2115 0.4255 MSEDIAPVFVDWEEQVICPERGNRATHFYLKDAFGNSVLAVVGTERSVRHMMYIVPDNFMKVYGSNESINAFKWRARREVVNWLTCLISQNHSQRAGVQLNDSEQAAESLELLKAGIHAKKKLLPDKLISRKLELQRSNIEWLGIAWFCHKQLKHYPGFCRNRTIINVHSFVYIMAQEERNYLGYVEDMYENKKSQKKVKVRWFHHGQEVKHVIPELNPQEGEVFITPHVQVISAECVSGPATVLNPKHYEKYLADVPHISLSEVHVCSRQFKNNKLKPFSLTKLRGYSNQPVPSCLYSPILSKRKTNCLKSNMEDDEDFTQDDPLMSSSKRKRSSKGNQVLENGSYDLKNSAPLNEMTKCEPKYPSLKLKLSKTTMGIKVIGPKPQCELSFMVDEKVEVLCQDSSIRGCWFRCKILTATQKRLKVQYDDVLDVDGPEKLEEWIPASKVAAPDKLGMRCSGRLAVRPCPPENTTDDTFEIGAAVDAWWSDGWWEGVVTAVNFCGVGILQVYSPGEDKFLTVEKRNVRISRDWVGKKWVDIPGKPNICSYISLNVSSSIRLTADSAVVDGSISDLESKPSSVPKVEVAQKIEPELSVSEAPDDPVETMKGMTLRKPLHAIHEGIDYNCDGGCDGDDDIVDADMKLLCAIDVDKDNNSGGGSASDTGIDDGRGGDDAQETSEGILKEENFDSAEPKLDAAEAIQVA* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0535 704 Pfam Agenet domain 396 470 IPR008395 -
Lan4g0535 704 MobiDBLite consensus disorder prediction 654 695 - -
Lan4g0535 704 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 592 - -
Lan4g0535 704 MobiDBLite consensus disorder prediction 667 693 - -
Lan4g0535 704 Pfam BAH domain 167 277 IPR001025 GO:0003682
Lan4g0535 704 MobiDBLite consensus disorder prediction 332 350 - -
Lan4g0535 704 MobiDBLite consensus disorder prediction 313 350 - -
Lan4g0535 704 ProSiteProfiles BAH domain profile. 164 283 IPR001025 GO:0003682
Lan4g0535 704 PANTHER BROMO ADJACENT-LIKE DOMAIN PROTEIN 8 592 - -
Lan4g0535 704 SMART BAH_4 164 283 IPR001025 GO:0003682
Lan4g0535 704 Gene3D - 148 377 IPR043151 -
Lan4g0535 704 SMART agenet_At_2 390 455 IPR014002 -
Lan4g0535 704 SMART agenet_At_2 476 534 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0535 Lan-Chr4 7872547 7879123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0535 409 532 PHD Transcription Factor Family AT5G58610 28.125 1.18e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0535 - - gmx:100816046 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0535 4 7872547 7879123 Lan19g0728 19 13630118 13636301 LSH