Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0528 ATGCAAACCTCTAAGAAACACGCAACTTCGCCCGATGTCTATTTATACCACCAGCCTGTGCAAGGAATTGATCCTTACACAAGTTACCAAATACTACAAAGCAATTCATGCCATGATATCCATGATAGTAGCAGCAGCCAAGGAACCACTGCTTCTTTTGAGACCATCAAGGATCAGTACTTTACCCTCGATTCGTCTCCAGCAATCATTGGTCTCATAGGTTGTGATTCTCCGTCCTATGCTAGTGTATCATCCGATACGAGCCACTTTTCTCCACAAGGTTCTCAATCATACAATTCAGATCAGCAACAGTCTTCTAACAACAACTATGGATCACCAATAAGTGTGTACTCTAGTGCTGATGATGACTATGAATTGAAGCACAAACTTAGAGAACTCGAGATTTCATTGTTGGGGCCTGAATCAGATATTGTCGAAAGTTGTCAATGTTGCTTCAAGGGTGACCACCAAGGTGGATCTCCAATAGATAAATATAATTGGACTCATATTGTAGAAATGATTCCTAAGTTAGACTTGAAAGAAGTCCTGGTTCTATGTGCACGAGCCGTGTCGGACGAAGATTTTCAAACAGTGATAGGGTGGATGGATAATGTGTTAGTGAAGATGGTATCTGTTGCTGGTGAACCGGTCCAGAGGTTAGGTGCTTACATGTTGGAGGGTCTTAGAGCAAGGTTGGAATCATCAGGGAGCCTAATCTACAAAGCCTTGAAGTGTGAACAACCAACAAGCAAAGATTTAATGACTTACATGCATGTCCTGTATCAGATTTGTCCATATTGGAAGTTTGCCTACATATCCACCAATGTTGTCATTGGAGAAGCAATGCAAAATGAACCGAGAATACATATAATTGACTTCCAAACTGCACAGGGCACACAATGGATGTTACTTATGCAAGCTTTTGCATGTAGGCCTGGTGGTCCTCCATTCATTCGCGTAACCGGTGTTGATGATTCCCAATCATTTCATGCTAGGGGTGGAGGACTAGATATTGTAGGGAAACGGCTCTCGGATTATGCCAAATCTTGTGGAGTGCCATTTGAGTTCCATAGTGCTGCAATGTGTGGCAGTGAGGTTGAACTAAAAAACCTTGTAATTCGACCTGGGGAAGCACTGGCTGTAAACTTCCCTTATGTTTTGCACCACATGCCGGACGAAAGTGTGAGCACGGAGAACCATAGAGACAGGCTGTTGAGATTGGTGAAGAGCTTGTCACCGAAGGTTGTGACGCTTGTTGAGCAAGAATCCAACACCAACACTTCTCCCTTTTTCCAAAGGTTTGTTGAGACCCTGGATTATTACACTGCTATGTTCGAATCAATAGACGTGGCGCGTCCTAGAGATGATAAGCAAAGGATCAGTGCAGAACAACACTGCGTGGCTCGGGACATCGTCAACATGATAGCTTGTGAGGGTGCTGAGAGGGTGGAAAGGCATGAACCTTTAGGAAAGTGGAGATCAAGATTTTCAATGGCTGGATTTGCACCATATCCATTGAGTTCATCCGTAACGGGTGCAGTCAGAAATATGTTGAATGAATTCAATGAAAATTATAGGGTTGCACATACAGATGGTGCTCTTTATCTTGGTTGGAAGAATAGACCTATGTCCAACTCTTCTGCTTGGAGATGTTACTGA 1659 0.4328 MQTSKKHATSPDVYLYHQPVQGIDPYTSYQILQSNSCHDIHDSSSSQGTTASFETIKDQYFTLDSSPAIIGLIGCDSPSYASVSSDTSHFSPQGSQSYNSDQQQSSNNNYGSPISVYSSADDDYELKHKLRELEISLLGPESDIVESCQCCFKGDHQGGSPIDKYNWTHIVEMIPKLDLKEVLVLCARAVSDEDFQTVIGWMDNVLVKMVSVAGEPVQRLGAYMLEGLRARLESSGSLIYKALKCEQPTSKDLMTYMHVLYQICPYWKFAYISTNVVIGEAMQNEPRIHIIDFQTAQGTQWMLLMQAFACRPGGPPFIRVTGVDDSQSFHARGGGLDIVGKRLSDYAKSCGVPFEFHSAAMCGSEVELKNLVIRPGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLDYYTAMFESIDVARPRDDKQRISAEQHCVARDIVNMIACEGAERVERHEPLGKWRSRFSMAGFAPYPLSSSVTGAVRNMLNEFNENYRVAHTDGALYLGWKNRPMSNSSAWRCY* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0528 552 Pfam GRAS domain family 179 550 IPR005202 -
Lan4g0528 552 ProSiteProfiles GRAS family profile. 170 550 IPR005202 -
Lan4g0528 552 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 549 - -
Lan4g0528 552 MobiDBLite consensus disorder prediction 84 112 - -
Lan4g0528 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0528 Lan-Chr4 7831094 7834808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0528 1 550 GRAS Transcription Factor Family AT4G17230 58.590 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan4g0528 GRAS 5.6e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0528 - - gmx:100819190 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0528 4 7831094 7834808 Lan19g0722 19 13549046 13552310 LSH
Lan12g1343 12 18962233 18963989 Lan4g0528 4 7831094 7834808 PCT