Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0527 ATGGAAATGGACTCCAGCAAACTTTTTATTGGAGGGATTTCCTGGGACACAAATGAAGACCGACTCAGACAGTATTTCCAGAATTTTGGAGATGTTGTGGAAGCTATGATAATGAAGGATCGGACCACGGGACGTGCCCGTGGTTTCGGGTTTATTGTTTTTGCTGATCCTTCTGTTGCTGAGAGAGTTGTTTTGGAAAAGCATGTCATAGATGGAAGAACTATTTATGTGACGTTCATGGTTATAATCTCTCACCTTTATTTTGCTGTAAGATTGGAGATGATAAATTCAAAAATCAGACTTGAAGAAATTCTGTTGTCGATCAAAGAAGGAAAAGAATGA 342 0.3889 MEMDSSKLFIGGISWDTNEDRLRQYFQNFGDVVEAMIMKDRTTGRARGFGFIVFADPSVAERVVLEKHVIDGRTIYVTFMVIISHLYFAVRLEMINSKIRLEEILLSIKEGKE* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0527 113 PANTHER TRANSFORMER-2-RELATED 1 76 - -
Lan4g0527 113 Gene3D - 3 82 IPR012677 -
Lan4g0527 113 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1 1 76 - -
Lan4g0527 113 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 75 IPR000504 GO:0003723
Lan4g0527 113 SUPERFAMILY RNA-binding domain, RBD 3 79 IPR035979 GO:0003676
Lan4g0527 113 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 82 IPR000504 GO:0003723
Lan4g0527 113 SMART rrm1_1 7 78 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0527 Lan-Chr4 7826089 7826656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0527 8 54 C2H2 Transcription Factor Family AT2G19380 36.170 3.02e-10 54.3