Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0510 ATGGATATTATGGTTCAACTTCAAAGGCAACTTTTTGATTATACTAATTCTCTATTCCATGAGGGGTTTCTAGATGAACAATTTAACCAGCTTCAACAACTTCAAGATGAAAGCAACCCAGATTTTGTGGTTGAAGTGGTGACTCTCTTCTTTGAAGATGCAGAGAGGCTTCTTAATGAGTTGACTAATACATTGAGCCAAGAAAACATTGATTTTAAAAGATTGGATGCTCATGTTCACCAGTTAAAGGGTAGCAGCTCCAGCATTGGTGCACAGAGAATTCACACAGTCTGCATTTCCTTCAGAAACTCATGTGAGGAGCAAAATGTTGAAGGGTGTCTTAAAAGCTTGCAACAAGTAAAACAGGAGTATTCCACAGTGAAAAGCAAGCTTGAGACTCTCTTCAAGATTTTGGCAGCAGGGGGGTCAGTTTTCTAG 438 0.3927 MDIMVQLQRQLFDYTNSLFHEGFLDEQFNQLQQLQDESNPDFVVEVVTLFFEDAERLLNELTNTLSQENIDFKRLDAHVHQLKGSSSSIGAQRIHTVCISFRNSCEEQNVEGCLKSLQQVKQEYSTVKSKLETLFKILAAGGSVF* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0510 145 Pfam Hpt domain 45 128 IPR008207 GO:0000160
Lan4g0510 145 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 39 141 IPR008207 GO:0000160
Lan4g0510 145 Coils Coil 51 71 - -
Lan4g0510 145 Gene3D HPT domain 1 145 IPR036641 GO:0000160
Lan4g0510 145 PANTHER HISTIDINE PHOSPHOTRANSFER PROTEIN 1 144 - -
Lan4g0510 145 CDD HPT 45 124 IPR008207 GO:0000160
Lan4g0510 145 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 4 136 IPR036641 GO:0000160
Lan4g0510 145 PANTHER - 1 144 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0510 Lan-Chr4 7717100 7719140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0510 K14490 - gmx:100306665 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0510 4 7717100 7719140 Lan2g0290 2 2476315 2481325 LSH
Lan4g0510 4 7717100 7719140 Lan16g1064 16 17822165 17827093 LSH