Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0509 ATGGAGTGCAACAAGGATGAGGCTATGAAGGCTAAGCAAATTGCTGAAATTAAAATGCAATGTGGTGACTTTGTAGGAGCACTGAAGTTTGCTACAAAGGCCAAAAGTATGTATGCTGATGTTGAAAACATTTCTAAGATCCTTACAGTTTGTGAGGTTCATAGTGCTGCACAGAACAAACTATCCGGGTCTGGCATGGACTGGTATGGAATTCTTCAAGCTGAACGATTTTCTGATGGTGCAGCCTTGAAGAAACAGTACCGGAGGCTTGCGCTACTACTTCATCCTGATAAAAATAAATTTTCTGGGGCAGAAGCTGCTTTTAAGTTGATTGGGGAGGCCAACAGGGTGTTGGGTGACGAAACAAATCGTTCTTTATATGACATGACTTGTGGAGTCTCTGTGAGAACTGCAGCGCCTAAAACCTCTCCACATCACTCAAATGGGAATGTATTTGCTGCAGCGCATGATGGAAATGCAACAAATTATCAGAAAAAATCTTCAAACCCTCCTTTTGCTTCTTCGAATGCATTTCAGCAAGCTGGGCAACAAGCAATCCAGACATTCTGGACATCTTGTAAACATTGCAATACTAAGTACCAATTCTACAGAATCTATGTAAATGCAAGCTTACGTTGTCCACGATGTATGAAATCCTTTACAGCTCTTGATTTGGGGAACCAGGGCTTCCCACCAGGACATACACAGAAGTCATTTAATAACGAAAACAAGGCTCCAAAGCATGTTCCACCAAAACCACCCTCAAAAAGTAAGGGTGTAAAGCCCGTTGGTGGAGGACATGCTGACAAGTTTTTTCAGCCACCCCCTGTATCTATGGAAAAATGTGCTGCTGGAGTTGGTGGACATTGTAAAGATGAAAAGAGTGAGGCTGGACATGCGGCTAGAGATGTGGCAAATGGTAATGTTCGTAAACCTAAAGCCATGGGGTCACAAACCTCAGCAAATGTTGGAAGTAAAAGAGTAAGGCAGTCAGCACCACATTCAGGAGAAGGTTTCAATTCTTCAAATGGTGATGGCATGAAAGATGCTGATGTCCAACAAAATGGTTTTGATCCTTCTAGACTCAATGCTAGGAGATCTTCCAGGCAAAAGAAGAATGTTTCCTATGCAGAAGATGATTTTGAAAGTACATCCAAAAAGCCACGACAAAATGAATCATTTAACAACAATCAAGCTGAGGAAATGAAAGAGCCTGCAAGTGGTGGGCTTTCGAATAGCAAAAATCCAGCTAGTTTTGCTACTTCTGTGGGTGATCAAAACAGAGAGATGGGAAATCAAGCAAGTAGTGCACCTGAAGATACACCTTTGATCAAAACAGATATTCAATGTCTTGATGCTGATTTTAGTGATTTTGAGAAGGATAAGGCTGAGAGTTGTTTTACTGTTAATCAATTCTGGGCTATTTATGATGACACTGATACTATGCCAAGATTTTATGCTCTTGTCAAGAAAGTGGCTTCCCCTTTCAAGTTGCAGATCACTTGGTTGGAACCTGACCCAGATGACGAAGGCGGGATTAGTTGGTTTAATGCAGATTTGCCTTTTGGTTGTGGTAAGTTCAAACTTGGTGGTACTCAGAAAACTGCAGACCGTGCTATGTTCTCTCATCAAATGCATGGTATAAAAGGAAGTGGCAAAGGGTCTTATATGGTATGTCCTAAGCAGGGTGAAACTTGGGCAATTTTCAGAGATTGGGATATCAAATGGAGTTCTGATCCAGAAAAGCGTCTGAAGTATGAATTTGACTATGTTGAAATCTTATCAGATTTTGCTGTGAATATTGGCATTGAAGTTGCTTATCTTGGGAAAGTGAAAGGGTTTGTTAGCCTCTTTCAGAAAACTGAGAAGAAAGGAACTAATGGATTTTGTGTTCATCCTAATGAGCTATATAGGTTCTCACATAGAGTACCTTCATACAAGATGACTGGTAATGAAAGGGAAGGTGTTCCAAAAGGATCTTTTGAACTGGATCCTGCTGCCCTGCCTTCTAATCTCTTTGAAGTTGGTGATTCTGGTGATGTGAGGATGGAGAATTGA 2058 0.4111 MECNKDEAMKAKQIAEIKMQCGDFVGALKFATKAKSMYADVENISKILTVCEVHSAAQNKLSGSGMDWYGILQAERFSDGAALKKQYRRLALLLHPDKNKFSGAEAAFKLIGEANRVLGDETNRSLYDMTCGVSVRTAAPKTSPHHSNGNVFAAAHDGNATNYQKKSSNPPFASSNAFQQAGQQAIQTFWTSCKHCNTKYQFYRIYVNASLRCPRCMKSFTALDLGNQGFPPGHTQKSFNNENKAPKHVPPKPPSKSKGVKPVGGGHADKFFQPPPVSMEKCAAGVGGHCKDEKSEAGHAARDVANGNVRKPKAMGSQTSANVGSKRVRQSAPHSGEGFNSSNGDGMKDADVQQNGFDPSRLNARRSSRQKKNVSYAEDDFESTSKKPRQNESFNNNQAEEMKEPASGGLSNSKNPASFATSVGDQNREMGNQASSAPEDTPLIKTDIQCLDADFSDFEKDKAESCFTVNQFWAIYDDTDTMPRFYALVKKVASPFKLQITWLEPDPDDEGGISWFNADLPFGCGKFKLGGTQKTADRAMFSHQMHGIKGSGKGSYMVCPKQGETWAIFRDWDIKWSSDPEKRLKYEFDYVEILSDFAVNIGIEVAYLGKVKGFVSLFQKTEKKGTNGFCVHPNELYRFSHRVPSYKMTGNEREGVPKGSFELDPAALPSNLFEVGDSGDVRMEN* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0509 685 MobiDBLite consensus disorder prediction 286 300 - -
Lan4g0509 685 Gene3D DnaJ domain 52 146 IPR036869 -
Lan4g0509 685 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lan4g0509 685 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lan4g0509 685 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lan4g0509 685 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 681 - -
Lan4g0509 685 CDD DnaJ 67 120 IPR001623 -
Lan4g0509 685 MobiDBLite consensus disorder prediction 312 349 - -
Lan4g0509 685 SUPERFAMILY Chaperone J-domain 63 130 IPR036869 -
Lan4g0509 685 MobiDBLite consensus disorder prediction 388 441 - -
Lan4g0509 685 Pfam Domain of unknown function (DUF3444) 447 652 IPR024593 -
Lan4g0509 685 Pfam DnaJ domain 67 128 IPR001623 -
Lan4g0509 685 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lan4g0509 685 PANTHER - 1 681 - -
Lan4g0509 685 SMART dnaj_3 66 123 IPR001623 -
Lan4g0509 685 MobiDBLite consensus disorder prediction 231 441 - -
Lan4g0509 685 MobiDBLite consensus disorder prediction 371 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0509 Lan-Chr4 7708004 7711592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0509 4 222 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.222 1.10e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0509 - - aprc:113873604 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0509 4 7708004 7711592 Lan2g0307 2 2638410 2644236 LSH
Lan4g0509 4 7708004 7711592 Lan8g0300 8 5098882 5101475 PCT
Lan8g0300 8 5098882 5101475 Lan4g0509 4 7708004 7711592 PCT