Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0504 ATGGGGTGTGTGATTGGCCGAGAAGTGTCGGGAATAGTCTCTGAGGCGAAGGAGGAGAAGAATTTGAGTGTTAAGTCAAACAGGAAGGTTGAGGAAGGCTCCACCAACGGTGCTGATGGAAATGTGGTAAAGGTTACGAATGGTGAGAAGGAGAAGGAAGAGAAGGGTGGTGAATCTGGTGATGATGCGACTCAGACTCAGCGGCCACAAGGTGAAAGAAGAAGAAAATTAAAGCCGAATCCTAGGCTAAGTAATCCCCCGAAGCATTTGCAGGGGGAGCAAGTAGCAGCTGGGTGGCCATCTTGGCTTACAGCAGTGTGTGGGGAAGCACTTAGTGGATGGACTCCGCGGAAAGCTGACACATTTGAGAAAATTGATAAGATTGGTCAAGGAACATATAGTAATGTGTACAAAGCTAAAGATATGTTGACCGGTAAGATTGTTGCACTGAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGTGTAAAATTCATGGCTAGAGAGATTCTTATTTTACGAAGATTGGATCATCCCAATGTTATAAAGCTAGAAGGTTTAGTTACATCGAGGATGTCCATGAGTTTGTATCTGGTGTTTGATTACATGGTGCATGATTTAGCTGGACTTGCTGCAAGTCCTGAAATCAAGTTCTCGGAGCCTCAGGTCAAATGTTACATGCATCAACTGCTATCAGGACTTGAGCACTGTCATAAGAGACATGTACTTCACCGTGATATTAAAGGATCAAATCTTCTGATTAACGAGGAAGGAATACTCAAGATTGCCGACTTTGGACTTGCATCTTTGTTTGATCCAGACCGCAAGCATCCTATGACTAATCGTGTAGTTACCCTTTGGTATCGGCCTCCTGAGTTGCTGCTCGGTGCCACAGAATATGGTGTTGGTGTGGACCTTTGGAGTGCTGGTTGCATTTTAGGAGAGTTATTTGCTGGGAAACCAATTATGCCTGGTCGTACAGAGGTGGAACAATTACATAAGATATACAAACTCTGTGGTTCACCTTCTGATGAGTATTGGAAGAAATCAAAGTTGCCCAACTCTACTTTGTTTAAACCCCGAGAACCATACAAGAGATGCATAAGAGAGACATTTAAAAATTTTCCACCTTCTTCACTACCCCTTATTGATACTCTTCTTGCTATTGATCCAGCAGAACGGAGGAGTGCCTCGGTTGCTTTAAGAAGTGAGTTCTTTACCACAGAACCTTGTGCTTGTGATCCTTCTAGTCTTCCAAAATATCCCCCCACCAAGGAAATGGATGCTAAACGACGGGACGATGAAGCAAGGAGATTAAGAGCTGCCGGCAAAGCTCGTGGTGATGGTGCAAAGAAGCATCGTACTCGTGATCGTGCTGTAAAACATGTTCTTGCTCCTGGAGCCAATGCTGAGATTCAATACAATATTGATCTGAGAAGGCGTCTAGTCTCTCATGCAAATGCTAAGAGCAAGAGTGAAAAGTTCCCTCCGCCACATGAAGATGGACAACTTGGATTTCCTTTGGGATCTTCACAACATATTGATCCAGATATTGTTCCGCATGATGTCTCTTTGGGTTCGACCTCGTATATCTATTCAAATGAACCATTCCAAGCTTGGTCAGGTCCCATTGGTAATTCTGCTAGCAATGGTGTGCCAAAGAAGAAGAAAAAACAAACTGCAAATGATGCATTGGACTTATCAAAACCACATAAAAATTCTCTCAAGGATAAAGTTAAAGGAAAGAAAGTCATAGCTTAG 1761 0.4321 MGCVIGREVSGIVSEAKEEKNLSVKSNRKVEEGSTNGADGNVVKVTNGEKEKEEKGGESGDDATQTQRPQGERRRKLKPNPRLSNPPKHLQGEQVAAGWPSWLTAVCGEALSGWTPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSMSLYLVFDYMVHDLAGLAASPEIKFSEPQVKCYMHQLLSGLEHCHKRHVLHRDIKGSNLLINEEGILKIADFGLASLFDPDRKHPMTNRVVTLWYRPPELLLGATEYGVGVDLWSAGCILGELFAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNSTLFKPREPYKRCIRETFKNFPPSSLPLIDTLLAIDPAERRSASVALRSEFFTTEPCACDPSSLPKYPPTKEMDAKRRDDEARRLRAAGKARGDGAKKHRTRDRAVKHVLAPGANAEIQYNIDLRRRLVSHANAKSKSEKFPPPHEDGQLGFPLGSSQHIDPDIVPHDVSLGSTSYIYSNEPFQAWSGPIGNSASNGVPKKKKKQTANDALDLSKPHKNSLKDKVKGKKVIA* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0504 586 MobiDBLite consensus disorder prediction 45 79 - -
Lan4g0504 586 PANTHER OS01G0367700 PROTEIN 49 561 - -
Lan4g0504 586 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Lan4g0504 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Lan4g0504 586 MobiDBLite consensus disorder prediction 416 456 - -
Lan4g0504 586 MobiDBLite consensus disorder prediction 542 586 - -
Lan4g0504 586 MobiDBLite consensus disorder prediction 556 586 - -
Lan4g0504 586 ProSiteProfiles Protein kinase domain profile. 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0504 586 SMART serkin_6 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0504 586 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Lan4g0504 586 Pfam Protein kinase domain 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0504 586 SUPERFAMILY Protein kinase-like (PK-like) 116 411 IPR011009 -
Lan4g0504 586 MobiDBLite consensus disorder prediction 16 94 - -
Lan4g0504 586 CDD STKc_CDK9_like 122 406 - -
Lan4g0504 586 PANTHER CELL DIVISION PROTEIN KINASE 49 561 - -
Lan4g0504 586 Gene3D Transferase(Phosphotransferase) domain 1 205 445 - -
Lan4g0504 586 MobiDBLite consensus disorder prediction 28 42 - -
Lan4g0504 586 MobiDBLite consensus disorder prediction 424 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0504 Lan-Chr4 7656635 7680718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0504 114 444 Core Cell Cycle Gene Families AT5G10270 51.297 2.92e-117 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan4g0504 Pkinase 8.4e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0504 4 7656635 7680718 Lan4g0504 4 7656635 7680718 ECH
Lan4g0504 4 7656635 7680718 Lan20g0680 20 5394724 5400778 PCT
Lan20g0680 20 5394724 5400778 Lan4g0504 4 7656635 7680718 PCT