Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0497 ATGTTTAATGGAGTACCAGACCAGCTCCACCAATTCATAACACCAATGACTTCACTTCCTCTTCATTTGCCTTTCCCTCTTCATGCTTCTTCTGCTTCTGCACCAACCAATATTTTTCCTTCTTTTGATCCTTATAACTCTTCTCCTCATCATCAATTGCCACTTCAACTCCAACCCAATCCCTTGCAACAATTACACCACCAACACCAACAACCTTCTACCCACAAAGAGCATGAAGCTGAGAAGGAACTTAGTACTGTGCCAATGAACTTTGAAATTGATCGAAGAGATCAAAGTATTGATCCTTGGACAAATGATGAAGTGCTTGCACTTTTGAAGATCAGATCTAGCATGGAGAGTTGGTTCCCAGAACTCACTTGGGAGCATGTCTCAAGAAAGCTAGCAGAGCTTGGATATAAGAGGAGTGCAGAGATTTGCAAGGAGAAGTTTGAAGAAGAAAGCAGATATTTTAACAACATTAACTACATCAAGAACAATAATAATAATTATAGGTTTCTTAGTGAGTTTGAAGAGTTTTATAATCAAGGTGATAATCATCAAGTTGACGAGACTGAAAAGCCAACAACCATAGAAGAGGAACAAAACAAGATCATGGACCTAGAAGAGGGTTCAACAAAACAAAAGGAACAAGATGATAATGAAGAAGAGGTGGTTGTGGAAAAAACAATGGAGGACATGAGGCATAAGAGGAAGAGGCTAAACAGGTTTGAGATGTTTAAGGGTTTTTGTGAGAGTATTGTGCACAAGATGATGGAACAACAAGAAGAGATGCACAACAAGTTGATCGAAGATATGATGAAGAGAGATGAAGAAAAGTTTGCAAGGGAAGAAGCTTGGAAGAAGCAAGAGATGGATAGGATGAACCAAGAGCTTGAGATTATGGCACAGGAACAAGCTATTGCTGGTGATAGACATGCGAACATAATTGAATTCTTGAACAAGTTCTCAGCAAGCACTTCTTCTTCTCCTAGTTCATGCCAAAACAAGGTAACAAATGTTTCAAACCCAAATACTTGCACTACTCCCTCCCAACCATCACAAAACCCTAATCCTTCTAATATGGTTCTCAATCATCTAAATAATGTTACTTCAGAAGCTGAAAACCCTAGCTCTATTCCTTGCCAAGAATCATTATTACAAAATGCTTCTTCTACTACTTCACCTCCAATTCTTCAGAACCCTAGTTCTTCTTATCTCAATAAGCACAATAATACAAATTCAGTTTCAAATAAAGCTTCCTCAAATGTTAAAGTTGAGAAAGATGGTGTTGGGAGAAGATGGCCAAAAGATGAAGTGTTGGCACTGATAAATCTCAGGTGCAGTAGTGTAAACAATAACAACAACAATGAAGAGAAGGAAGGAAACAAAGCACCACTGTGGGAGAGAATCTCACAAGGGATGTTGGAGTTGGGATATGAGAGAAGTGCAAAAAGATGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGAAAAACAAAAGATTTTAATAAGAAAAGATCAGTTGATTCAAGAACTTGTCCTTACTTCCATCAATTGAGTAATCTATATAATCAAGGCAAGCTTGTTCTACAATCTGAAAAGCTAGAAAATCAGTTGAGTCCACAAGCAAATAATCCTGTGGGGGTGAGTGTGACTACACCAGATCAAAATCAAAATCAAAATCAATGCCAATTAGCTGAGTCTTCTCAAGTGGGGTCTGGTGGGTACAGTGTTGATCATAATGGAGGTGAGAAAACTTTGATGCAAGTACCTTCTTTGGATTTTGATCAGTTTTAA 1800 0.3811 MFNGVPDQLHQFITPMTSLPLHLPFPLHASSASAPTNIFPSFDPYNSSPHHQLPLQLQPNPLQQLHHQHQQPSTHKEHEAEKELSTVPMNFEIDRRDQSIDPWTNDEVLALLKIRSSMESWFPELTWEHVSRKLAELGYKRSAEICKEKFEEESRYFNNINYIKNNNNNYRFLSEFEEFYNQGDNHQVDETEKPTTIEEEQNKIMDLEEGSTKQKEQDDNEEEVVVEKTMEDMRHKRKRLNRFEMFKGFCESIVHKMMEQQEEMHNKLIEDMMKRDEEKFAREEAWKKQEMDRMNQELEIMAQEQAIAGDRHANIIEFLNKFSASTSSSPSSCQNKVTNVSNPNTCTTPSQPSQNPNPSNMVLNHLNNVTSEAENPSSIPCQESLLQNASSTTSPPILQNPSSSYLNKHNNTNSVSNKASSNVKVEKDGVGRRWPKDEVLALINLRCSSVNNNNNNEEKEGNKAPLWERISQGMLELGYERSAKRCKEKWENINKYFRKTKDFNKKRSVDSRTCPYFHQLSNLYNQGKLVLQSEKLENQLSPQANNPVGVSVTTPDQNQNQNQCQLAESSQVGSGGYSVDHNGGEKTLMQVPSLDFDQF* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0497 599 Pfam Myb/SANT-like DNA-binding domain 432 522 IPR044822 -
Lan4g0497 599 Pfam Myb/SANT-like DNA-binding domain 101 175 IPR044822 -
Lan4g0497 599 ProSiteProfiles Myb-like domain profile. 95 154 IPR001005 -
Lan4g0497 599 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 13 588 - -
Lan4g0497 599 MobiDBLite consensus disorder prediction 387 423 - -
Lan4g0497 599 Gene3D - 434 499 - -
Lan4g0497 599 Gene3D - 103 159 - -
Lan4g0497 599 ProSiteProfiles Myb-like domain profile. 433 494 IPR001005 -
Lan4g0497 599 MobiDBLite consensus disorder prediction 387 429 - -
Lan4g0497 599 CDD GT1 103 157 - -
Lan4g0497 599 MobiDBLite consensus disorder prediction 541 599 - -
Lan4g0497 599 MobiDBLite consensus disorder prediction 327 361 - -
Lan4g0497 599 MobiDBLite consensus disorder prediction 541 577 - -
Lan4g0497 599 MobiDBLite consensus disorder prediction 63 82 - -
Lan4g0497 599 Coils Coil 197 217 - -
Lan4g0497 599 CDD GT1 432 501 - -
Lan4g0497 599 PANTHER - 13 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0497 Lan-Chr4 7503300 7506015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0497 1 526 Trihelix Transcription Factor Family AT5G28300 40.532 6.43e-102 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan4g0497 Myb_DNA-bind_4 7.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0497 - - ccaj:109795059 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0497 4 7503300 7506015 Lan4g0497 4 7503300 7506015 ECH
Lan4g0497 4 7503300 7506015 Lan8g0281 8 4892552 4895203 PCT
Lan4g0497 4 7503300 7506015 Lan20g0695 20 5650139 5652527 PCT
Lan4g0497 4 7503300 7506015 Lan4g1322 4 22039410 22042264 PCT
Lan8g0281 8 4892552 4895203 Lan4g0497 4 7503300 7506015 PCT
Lan20g0695 20 5650139 5652527 Lan4g0497 4 7503300 7506015 PCT
Lan4g1322 4 22039410 22042264 Lan4g0497 4 7503300 7506015 PCT