Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0496 ATGATTCATAGATTTTTCATTGCAAGATTAACTGCATCATTCATTCAGCGCAACCGCGCCCATATCCAATTGGGTTCTCTGCTATCACACAATGGTTTCATTTTCTTTAACCCATTCACCTCAGGCTCTTCTTCTAAACCTGAATCACAATCAAATCAGCACAAAGCTCGCACCTTTACTGTTTCTTACCTCATCAACTCATGTGGGCTGTCTCCTGAATTGGCTCTCAAACTCTCCAAAAGGGTTAAATTGAAAAACCACGATGGCCCAAATGCTGTTCTTGATCTTCTAAAGAGTTATGGTTTTTCGAAAACACAGTTATCTATCTTTATCAAGAGATTACCTAAAGTGCTTGTAGCTGAACCTGACAAGACCCTTCTCCCGAAACTCAAGTTCTTCGAATCTATTGGGGTTTCAAAAACTGACCTCCCCAAAATCCTCATTGGAAACTCTTCATTATTAACAATAGGCTTGAAGAACAACATTATCCCTCGGTATAATGTCATAAGGAGTCTCGTTCGCAGCGATGAGGAAGTAGTTTCAACTTTGAAGCATGGGCCGCGGTACTTTCACGGGTATGAGGTAATAAATGATTCAGTTCAGAATGTAGAGGTTTTGAGACTGCTTGGCTTGCCTCAAAGTTCCATCTCTCTGTTGGTAACCAATTTCCCTAGTGTAGTGTTTATGAAGCATTCAAGGTTCAATGAGGCTGCTGAGACGGTGAAAGAAATGGGGTTTGATCCTACGAAAACAAATTTTGTTATAGCACTTCAAGTATTCGCAAAGATGGATAAGGCAATGTGGAATGCGAAATTAGAGGTTTTTGAGAGGTGGGGGTGGTCCAGAGATATCTGTCTATTGGCTTTCAAAAAGTATCCACAGTATATGATGGTTGCAGAAAAGAAGATTATGAAAACACTTGGCTTCTTGATGGAGAATATGGATTGTTCCTTAGAAGACATTGCTCGATGCCCAGCGATTTTGAACCGTAACCTGGAGAAGACATTAATCCCTAGATGTGCAGTTGTTAAAGTTTTGAAGTCTTGTGGTTTGGTAAAGAATGATTTGCTCATAGGTAGCTTTATGCTGATTTCTGAGAAAACTTTTGTGGAGAAATATGTGACCCGATTTCAGAATAATGTGCCTCTACTGTTGGACGTGTATGAAGGTAAAAAGTTAGATTGA 1185 0.3983 MIHRFFIARLTASFIQRNRAHIQLGSLLSHNGFIFFNPFTSGSSSKPESQSNQHKARTFTVSYLINSCGLSPELALKLSKRVKLKNHDGPNAVLDLLKSYGFSKTQLSIFIKRLPKVLVAEPDKTLLPKLKFFESIGVSKTDLPKILIGNSSLLTIGLKNNIIPRYNVIRSLVRSDEEVVSTLKHGPRYFHGYEVINDSVQNVEVLRLLGLPQSSISLLVTNFPSVVFMKHSRFNEAAETVKEMGFDPTKTNFVIALQVFAKMDKAMWNAKLEVFERWGWSRDICLLAFKKYPQYMMVAEKKIMKTLGFLMENMDCSLEDIARCPAILNRNLEKTLIPRCAVVKVLKSCGLVKNDLLIGSFMLISEKTFVEKYVTRFQNNVPLLLDVYEGKKLD* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0496 394 Pfam mTERF 94 305 IPR003690 GO:0003690|GO:0006355
Lan4g0496 394 Pfam mTERF 263 369 IPR003690 GO:0003690|GO:0006355
Lan4g0496 394 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 35 391 - -
Lan4g0496 394 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Lan4g0496 394 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Lan4g0496 394 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Lan4g0496 394 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Lan4g0496 394 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Lan4g0496 394 Gene3D Transcription termination factor 3, mitochondrial 198 380 IPR038538 -
Lan4g0496 394 Gene3D Transcription termination factor 3, mitochondrial 67 197 IPR038538 -
Lan4g0496 394 PANTHER CGI-12 PROTEIN-RELATED 35 391 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0496 Lan-Chr4 7493647 7495381 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan4g0496 mTERF 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0496 K15032 - gmx:106799612 438.343