Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0493 ATGGATAGGGTCTTCTCAGTCGAAGAAATCGCCGAACACTTCTGGTCGCCGGCGATTCCCTCTTCCTTGTCCTCCGGCGCCGCCGCCAACGAATCATCCAAGATGAACCGCAGTGCTTCCGAGTGGGCCTTCCAACGCTTCCTCCAGGAATCCACATCCGCAACATTATCACCTTCTTCTTCATCCGTTGCTGATCGAAACGACGACGTCGTTTTTGTCGAAAACAATAGCCACCAACCCAAACTGGATCGCACCCAGAGCGTGGACGCCACGCCCCTTCTGAAAAACGGTGCCGTTTTGGCCAATGGGCCCACTGTTCCTCCTCCTGCGCCTTTTGATTCTGAAGAGTATCAAGCTTTCTTGAAGAGCAAGTTGGATCTCGCGTGCGCTGCTGTCGCTGTTGTTAGGGGTTCTTTGGTCAAATCTCAAGATGAAGCTACTTTTCCTGACAGTGGACCACAGCCATTGTCTAATCCTTCTCCAGTTGGACCTCAGCCTACTTTTACAGGATCTGGTACTTCTGGAAATGACCCACCTAAATTGCAAGACAAAGATGCCAACGCACCAGTTGGGATTCCTTCCATACCTGCCATGCAAAAGAAACCTGCTGTTGTAATCAGGCCATCAACAAGTGGATCATCAAGAGAACTGACAGATGATGAGGAAATGGAAGGAGAAACAGATATGAATGATAACATGGACCCTGCTGATGTGAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCAGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACAGACCTGGAGAAACAGGTGAATCAATTAAGAGGTGAAAATTCTTCCTTGTTAAAGCGCCTTACTGATATAAGCCATAAGCACAATGAATCTGCTGTTGACAACAGAGTATTGAAAGCTGATATTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTAAAAAGAATTACTGGGTTGAACCCAATGTTTCATGCCATGTCTGATATATCAACCATGAACATGCCTTCATTTAATAGAAGCTCTTCTGACACATCAGCTGATGCAGCTGTTCCTGTGCATGACAATAACCCAAATCATCATTTTTATCAACAATCCACATCTAATAATCCTATACCCAGTAATAATGGGTTGAGGGACATTCCTTCTTCAATTGAAAATGTGCAGCGGAGTGCAGCCGCCATGGTAGGAGGGAGCAAGATGGGTCAGCCAACTTCCTTGTGTCCGGTGACCAGCTTGGAACACCTTCAGATGCAGATTCGTGGTGGTGTGGGCTCTACCGGAGGATCATCTAATGGAGAGATTAATAGAGTTACCAAGCCAAATTGA 1341 0.4646 MDRVFSVEEIAEHFWSPAIPSSLSSGAAANESSKMNRSASEWAFQRFLQESTSATLSPSSSSVADRNDDVVFVENNSHQPKLDRTQSVDATPLLKNGAVLANGPTVPPPAPFDSEEYQAFLKSKLDLACAAVAVVRGSLVKSQDEATFPDSGPQPLSNPSPVGPQPTFTGSGTSGNDPPKLQDKDANAPVGIPSIPAMQKKPAVVIRPSTSGSSRELTDDEEMEGETDMNDNMDPADVKRVRRMLSNRESARRSRRRKQAHLTDLEKQVNQLRGENSSLLKRLTDISHKHNESAVDNRVLKADIETLRAKVKMAEETVKRITGLNPMFHAMSDISTMNMPSFNRSSSDTSADAAVPVHDNNPNHHFYQQSTSNNPIPSNNGLRDIPSSIENVQRSAAAMVGGSKMGQPTSLCPVTSLEHLQMQIRGGVGSTGGSSNGEINRVTKPN* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0493 446 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 237 289 IPR004827 GO:0003700|GO:0006355
Lan4g0493 446 Pfam Basic leucine-zipper C terminal 306 428 IPR020983 -
Lan4g0493 446 PANTHER BASIC LEUCINE ZIPPER 63 1 420 - -
Lan4g0493 446 Coils Coil 248 282 - -
Lan4g0493 446 MobiDBLite consensus disorder prediction 427 446 - -
Lan4g0493 446 PANTHER BZIP TRANSCRIPTION FACTOR 1 420 - -
Lan4g0493 446 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 242 257 IPR004827 GO:0003700|GO:0006355
Lan4g0493 446 Coils Coil 297 324 - -
Lan4g0493 446 Gene3D - 238 292 - -
Lan4g0493 446 MobiDBLite consensus disorder prediction 143 238 - -
Lan4g0493 446 SMART brlzneu 235 299 IPR004827 GO:0003700|GO:0006355
Lan4g0493 446 SUPERFAMILY Leucine zipper domain 239 288 IPR046347 GO:0003700|GO:0006355
Lan4g0493 446 MobiDBLite consensus disorder prediction 163 180 - -
Lan4g0493 446 Pfam bZIP transcription factor 238 287 IPR004827 GO:0003700|GO:0006355
Lan4g0493 446 MobiDBLite consensus disorder prediction 426 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0493 Lan-Chr4 7472131 7481081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0493 1 328 bZIP Transcription Factor Family AT4G02640 40.240 8.85e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan4g0493 bZIP_C 1.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0493 K25784 - gmx:778135 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0493 4 7472131 7481081 Lan4g0493 4 7472131 7481081 ECH
Lan4g0493 4 7472131 7481081 Lan20g0704 20 5727221 5732314 PCT
Lan20g0704 20 5727221 5732314 Lan4g0493 4 7472131 7481081 PCT