Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0464 ATGGCACACCGGTGGTGGACTGATTCAGTGGGTCTCGGCGTGGTGGAGAACTCAACTAACTCTCCCCCTATGAAAAAACCTGATCTGGGTTTCTCCATGAACAACAACAACACAGGTTTAAATCACGGTGGCGTTGGAGTAAGGGAAGAAGAAGAGGAGGAGAAAGAGAACAGCGACGAACCCAAAGAGGGAGCAATTGAAGTAGCCACCACGCGCCGCCCTAGGGGCCGTCCAGCCGGTTCAAAGAACAAGCCAAAACCACCAATATTTGTGACAAGAGAAAGCCCTAACGTGCTTCGAAGCCACGTCATGGAGATAGCAAACGGAGCTGATATCGCTGATAGCGTCATTCAGTTCGCAAGAAGGCGTCAGAGAGGTGTTTGTATTTTAAGTGGCAGTGGGAATGTTATTAATGTCACGTTGCGTCAGCCCACAGCACCAGGTGCAGTCGTGGCACTACAGGGTCGGTTTGAGATTCTTTCTTTAACCGGCTCGTTCTTGCCAGGACCGTCTCCACCTGGCACCATTGGACTAACCATCTACCTTGCTGGAGGGCAAGGACAGGTTGTTGGGGGTTTGGTGGTGGGCCCAATGGTGGCGGCTGGGCCAGTTATAATAATGGCAGCTACATTTTCCAATGCAACCTACGAGAGGTTGCCACTGGAAGATGAAGAAGGAGAGGGATCACCGCCGGGAGGGTCCATCGGAGAAGGTGGTCCGTCGTTGATTCCGGTGTATAATAACAATGTTGCTCCGTCAAATTTGGCTAGTTTTACAAATGGGCAACAACATTTGAACCGTGAAGTTGATTATTCTACTTGGGCTCATGTTAGGCCCCCCTACTAA 846 0.5071 MAHRWWTDSVGLGVVENSTNSPPMKKPDLGFSMNNNNTGLNHGGVGVREEEEEEKENSDEPKEGAIEVATTRRPRGRPAGSKNKPKPPIFVTRESPNVLRSHVMEIANGADIADSVIQFARRRQRGVCILSGSGNVINVTLRQPTAPGAVVALQGRFEILSLTGSFLPGPSPPGTIGLTIYLAGGQGQVVGGLVVGPMVAAGPVIIMAATFSNATYERLPLEDEEGEGSPPGGSIGEGGPSLIPVYNNNVAPSNLASFTNGQQHLNREVDYSTWAHVRPPY* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0464 281 MobiDBLite consensus disorder prediction 13 42 - -
Lan4g0464 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Lan4g0464 281 ProSiteProfiles PPC domain profile profile. 96 233 IPR005175 -
Lan4g0464 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 8 228 - -
Lan4g0464 281 MobiDBLite consensus disorder prediction 13 92 - -
Lan4g0464 281 Gene3D - 99 226 - -
Lan4g0464 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 228 IPR014476 GO:0003680
Lan4g0464 281 CDD DUF296 100 183 IPR005175 -
Lan4g0464 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0464 Lan-Chr4 7016778 7017839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0464 1 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 54.515 1.79e-85 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0464 - - gmx:100795097 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0464 4 7016778 7017839 Lan4g0464 4 7016778 7017839 ECH