Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0463 ATGGAACCCAACAACAACAACAACAACCTCAGCTCCTACTTCCACCACTTCAACCACCACCAGTCACCGTCCAATGGGGTGTTGCCACCAACCACTGACGGTTCCCACTCCCACATACTCTTCCCTCAAACCACCGCAACTACTGTAGTACCCTCTCCCCCTCCCTCTGCAGTGTCCTCACAATCTCAATTGCAAAAGAAGAAGCGTGGGAGGCCAAGAAAATACGCTTCACCTGAACAAGCACTTGCTGCTAGGAAAGCTGCTACGACGTCGTCTTCTCCCGCTTCCGCTACTCTCTCTGTTGCTTCTTCCAAGAAATCGTCGAAGTCCTTTTCTATAGGCACTGTAGGACAAGATTTCAGTACACAGTTCATTACTGTTCTCGCCGGTGAGGACGTTGGCCAAAAAATTATGTTGTTCATGCAACAAAGCAGGCGTGAGATATGCATTCTGTCGGCATCTGGTTCCATCTCTGATGCCTCTCTTAGTCAGCCAGCAACTTCAGGAGGCAGTATTACATATGAGGGTCGGTTTGAGATTATTTCACTTAATGGTTCCTATATTCGTAATGAAGTTGGAAGTCGATCTGGTGGTCTCAGTGTATGCTTATCTAGTACCGATGGGCAAATCATAGGTGGTGGCGTTGGTGGACCCCTTAAAGCTGCTGGTCCAGTTCAGGTCGTCCTTGGTACATTCACCATTGACCCCAAGAAGGATGCAAGTGCTGGAATTAAAGGTGATGTTGCTTCCAGTAAGTTGCCCCCACCACCGGTTGGTGAATCAGTATCAAGTTTTGGCTTCGCCCGAACAGTTGACTCTTCTACTGGGAATCCAGTCAGGGGAAATGAGGAGCAACAAACTATTGGAGGAAGTCACTTCATGATTCAACAAGGTGGTATGCAAGGGACACATTCTCGTCCCTCCGACTGGGGAGGCCACCCGGATTCAAGAAATGTTGCCTTTGAACTGACAGGAAGAACAGGCCAGGGAGCACAACAGTCACCTGATGAGAATGGGGACTATGAGTAG 1029 0.4888 MEPNNNNNNLSSYFHHFNHHQSPSNGVLPPTTDGSHSHILFPQTTATTVVPSPPPSAVSSQSQLQKKKRGRPRKYASPEQALAARKAATTSSSPASATLSVASSKKSSKSFSIGTVGQDFSTQFITVLAGEDVGQKIMLFMQQSRREICILSASGSISDASLSQPATSGGSITYEGRFEIISLNGSYIRNEVGSRSGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQVVLGTFTIDPKKDASAGIKGDVASSKLPPPPVGESVSSFGFARTVDSSTGNPVRGNEEQQTIGGSHFMIQQGGMQGTHSRPSDWGGHPDSRNVAFELTGRTGQGAQQSPDENGDYE* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0463 342 MobiDBLite consensus disorder prediction 322 336 - -
Lan4g0463 342 MobiDBLite consensus disorder prediction 295 342 - -
Lan4g0463 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 232 IPR005175 -
Lan4g0463 342 MobiDBLite consensus disorder prediction 1 101 - -
Lan4g0463 342 MobiDBLite consensus disorder prediction 1 65 - -
Lan4g0463 342 Gene3D - 122 248 - -
Lan4g0463 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 336 IPR039605 GO:0003680
Lan4g0463 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 336 - -
Lan4g0463 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 119 233 - -
Lan4g0463 342 MobiDBLite consensus disorder prediction 84 101 - -
Lan4g0463 342 MobiDBLite consensus disorder prediction 240 261 - -
Lan4g0463 342 CDD DUF296 125 232 IPR005175 -
Lan4g0463 342 ProSiteProfiles PPC domain profile profile. 117 256 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0463 Lan-Chr4 6990743 6994512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0463 33 342 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 44.380 1.21e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0463 - - lang:109345383 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0463 4 6990743 6994512 Lan4g0463 4 6990743 6994512 ECH