Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0461 ATGGCTGGAAGCATGAATTGCTTACCATGCTTTACATCTCAGAAAAGTAAGAAAAGCAATAGCAAAAGGGAGCATGGATCTACACCACCTGAAAATGCTATGGCAAAAGCACCAGATATAAAGAAACCAAGATCAGATGAACCAAACCAGGTTTTTGACCCTGCAAATATTAATGCACAAAATTTCACTTTCCGAGAGCTAGCAACTGCAACAAAGAACTTCAGGCAAGAATGCCTCATTGGTGAAGAAGGCTTTGGCAAAGTCTACAAAGGGATCATTCCTGCAACTGGCAAGGTAGTGGCCGTAAAGCAACTCGACCGAAATGGTATGCAAGATAGTAAGGATTTTCTGGTTGAGGTTTGGGCACTAAGTCTCTTGCACCATGAAAATCTTGTCAATCTCATTGGCTATTGTGCTGATGGGGATCAACGTCTTCTGGTTTATGAATTCATTCAATCCATTCCTCTAGAAGACCGTCTTTTCGAGAAAAAAGATGATGAACCTCCATTAGATTGGTACAACAGAATGAAAGTAGCAGTTGGAGCTGCAAGAGGAGTAGAGTATTTGCATGACAGTGCCAATCCCCCTGTTATATACCGGGACCTGAAAGCATCAAACATTTTACTAGATGAGAATATGAATGTAAGACTAATTGATTTTGGAACGGCTAAGTTTAGTGGTGGGGATAATAAAATGACCCCTTCACCTGCAAGAGTTATGGGTACCTATGGTCATTGTGCTCCCGAGTATGTAAGAACAGGACAACTCACCATTAAATCAGATGTATATAGTTTTGGAGTTGTCTTGCTTGAGCTTATAACTGGACGGCGAGCCGTCGATACCAGAAGACCAAATGATGAGCAAAACCTAGTTTCATGGGCGCAACCCTTATTCAGGGACCCAAAAAGGTTTCCAGATATGGCAGATCCACATCTTAGTAAACAATTCCCAGAAAAGGATCTCAACCAAGCTGTTGCAATAACAGCAATGTGCTTACAAGAGGAACCAGAAGCTCGCCCTTTGATGAGTGATGTTGTAACTGCTCTAAGCTTTCTTTCCGTAGTTCCTCCTGCAAATGCTATTCCACCCTCTCTACCACCTGCAGTCTTGGTCTCTAAGCACAGTGAAGGTGCAAGTGAAAGCGAAAGCGAATATGAAAGTGGAAGCGAATCAGAATCGGGTAAGGAGAGCCGCAAAAGGTATAGTTCAAAGAAGGGTTCTTCTAAGTATCAGGATGGAGCAAGTTCAAAATACCAAGAAAGTGATGTCTCAGATATTGAAGATACTATGGGAAGCAAGAAGTTTCACTCCAAATCAAGCCGCAAAAGTAGTGCAAGATCAAGGAATGGAACAATCACTTCAGAATCAGAAGATGGAAGTGCTTCTTCCACCAACCAAAGTAGTAGGAAATCACACAAAAATTTAAGCCAAAAGAGTACTAGAAAATCTTCTACCAGAGAGTTAAGCCAAAAGAGCAGCAAAAAAACTTCTGCCAAAGATTTAAGACAAAAGAGTAGCAGAAAATCTTCCATAAAAGATATAAGCTCAAAGAGCAGCAGAAAATCTTCTGTCAAAGTTTTAAGCCACAAGAGTAGCATGGCATCCAATGAGGATGGAAGCATTTTCTTGACCCAAAATAGCACCAAGAGCAGCATGGAATCAGATCATGGAGGCTATGCATTTCGGCGTAATAGCAGCAGAATATCACAAGGGAACATATCTTCAGGCCTTACCAGCAGTGGAAGTTTTCATTCAGATAACAGCAACAGCAAAAGATCAGAAGAGGAGAGAGGAAGCATGCATTATCATGCTAGTAGCATGGGATCAGATGAGGGAAGTGGCCACCATTTCGATGAATAA 1860 0.4156 MAGSMNCLPCFTSQKSKKSNSKREHGSTPPENAMAKAPDIKKPRSDEPNQVFDPANINAQNFTFRELATATKNFRQECLIGEEGFGKVYKGIIPATGKVVAVKQLDRNGMQDSKDFLVEVWALSLLHHENLVNLIGYCADGDQRLLVYEFIQSIPLEDRLFEKKDDEPPLDWYNRMKVAVGAARGVEYLHDSANPPVIYRDLKASNILLDENMNVRLIDFGTAKFSGGDNKMTPSPARVMGTYGHCAPEYVRTGQLTIKSDVYSFGVVLLELITGRRAVDTRRPNDEQNLVSWAQPLFRDPKRFPDMADPHLSKQFPEKDLNQAVAITAMCLQEEPEARPLMSDVVTALSFLSVVPPANAIPPSLPPAVLVSKHSEGASESESEYESGSESESGKESRKRYSSKKGSSKYQDGASSKYQESDVSDIEDTMGSKKFHSKSSRKSSARSRNGTITSESEDGSASSTNQSSRKSHKNLSQKSTRKSSTRELSQKSSKKTSAKDLRQKSSRKSSIKDISSKSSRKSSVKVLSHKSSMASNEDGSIFLTQNSTKSSMESDHGGYAFRRNSSRISQGNISSGLTSSGSFHSDNSNSKRSEEERGSMHYHASSMGSDEGSGHHFDE* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0461 619 MobiDBLite consensus disorder prediction 372 619 - -
Lan4g0461 619 SUPERFAMILY Protein kinase-like (PK-like) 60 380 IPR011009 -
Lan4g0461 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lan4g0461 619 Pfam Protein kinase domain 76 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0461 619 PANTHER RECEPTOR KINASE-LIKE PROTEIN 5 588 - -
Lan4g0461 619 CDD STKc_IRAK 80 349 - -
Lan4g0461 619 MobiDBLite consensus disorder prediction 1 53 - -
Lan4g0461 619 MobiDBLite consensus disorder prediction 484 519 - -
Lan4g0461 619 MobiDBLite consensus disorder prediction 421 435 - -
Lan4g0461 619 MobiDBLite consensus disorder prediction 563 587 - -
Lan4g0461 619 Gene3D Transferase(Phosphotransferase) domain 1 154 353 - -
Lan4g0461 619 ProSiteProfiles Protein kinase domain profile. 74 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0461 619 MobiDBLite consensus disorder prediction 520 554 - -
Lan4g0461 619 PANTHER OS07G0668900 PROTEIN 5 588 - -
Lan4g0461 619 MobiDBLite consensus disorder prediction 388 406 - -
Lan4g0461 619 Gene3D Phosphorylase Kinase; domain 1 58 150 - -
Lan4g0461 619 MobiDBLite consensus disorder prediction 444 473 - -
Lan4g0461 619 SMART serkin_6 74 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0461 Lan-Chr4 6979994 6983548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0461 5 356 Glycoside Hydrolase AT3G07070 63.014 1.04e-160 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan4g0461 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0461 - - lang:109335196 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0461 4 6979994 6983548 Lan19g0598 19 11247872 11251057 LSH