LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan4g0458	ATGTTCAAATTTCTGAAAGAAGTTGTTGGTGGATCTGGTGCTGGACTCAAAGATCTCCCTTACAACATCGGTGAACCTTACTCTTGTGCTTGGGGCTCTTGGCTTCATTGCCGTGGCACCTCCAAGGATGATGGTTCTGCAGTTTCAATATTTTCTTTATCAGGAAGTAGCGCTCAGGATGGGCATTTAGCTGCGGGTCGAAATGGAGTCAAACGTCTCCGTACGGTTCGACATCCAAATGTTTTGTCGTTTCTTCACAGTGCAGAGATTGAAACTTATGATGCTGGTACTCCCAAGGTTACGATTTATATTGTAACCGAGCCTGTAATGCCTTTGTCAGACAAAATTAAGGAGTTAGGTCTTAAAGGTACACAAAGGGATGAATATTATGCTTGGGGCCTGCATCAAATAGCTAAAGCTGTGAGCTTCTTAAATAATGATTGTAAACTAGTTCATGGTAATGTTTGCTTGGCTAGTGTTGTTGTCACACAAACTTTGGATTGGAAACTCCATGCACTTGATGTTTTATCGGAGTTTGATGGGAGTAATGATGCTGCCTCCGGGCAAATGCTGCAATATGCATGGCTTGTTGGAACACAATACAAACCAATGGAGTTGGCAAAATCTGACTGGGCTGCAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGTTGTCTAATCTATGAGCTATTCTCGGGTACGAAGTTGGCCAAAACAGAGGAGCTACGCAACACAGTCTCCATTCCCAAGTCTCTGCTTCCAGATTATCAGCGGCTACTGAGTTCCATGCCTTCCCGAAGATTAAATACATCAAAGCTTATAGAAAGTGAGTATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTTAGTTTGAAAGATAGTGTTGAAAAAGATACCTTCTTCCGCAAGCTTCCAACTTTAGCAGAGCAGCTTCCTCGTCAGATCGTGTTGAAGAAGTTACTTCCTGTATTAGCTTCTTCCCTTGAATTCGGTTCAGCTGCTGCCCCCGCTTTGACTGCATTGTTGAAAATGGGTTCCTGGCTTTCAGATGAGGAATTTCGCGTCAAGGTGCTTCCATCAATTGTAAAACTCTTTGCCTCCAATGACCGAGCTATTCGAGTTGGCCTTCTGCAACATATTGATCAATATGGAGAGTCATTATCACCACAAATGGTTGACGAGCAGGTTTACCCTCATGTTGCTACTGGGTTCTCTGATACATCTGCTTTTTTGAGGGAACTGACTCTCAAGTCCATGCTAGTTCTTTCTCCGAAGCTGTCTCAAAGGACCATTTCAGGGTCGTTATTGAAGCATCTGTCGAAGTTACAGGTTGATGAAGAGGCAGCTATTCGAACAAATACTACCATCTTATTGGGAAATATTGCAACCCACTTAAACGAAGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACTGTCCGCGCTTTACGTGATACTTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCCTACTATGACATAACTGAAGTTGCGACCCGGATTCTTCCCAACGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGAACCAAGGCATTTCAAGCTGTTGATCAATTTTTGCAGATAGCAAAGCAATATTATGAAAAGACAAATGCAGCAGACACTACTGGGGGTGCGGGCATGGGAATCTCATCAAATCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACCCTGAAAGGTAAACCTTCTGATCATGCTCCAGTTGCTTCTGCAAGTTCTAGTGCACTTACTCCCTCATCTTCTAATGCCAGCTCAGCTGTAGATACTCCATCGACAGCACCTGTCCGTGTAAGCTCCACAACAGATTTTGCTGAACACCCGGCACCTTTCCGTGTAAGCTCCACACCAGATTTTGCTGAGCACCATGTGCCTACATCCCCAACATCAACAGATGGCTGGGGAGAACTAGAGAATGGAATCGATGGGGAGCATGAAAATGATAAGGATGGGTGGGATGATCTGGAACCACTTGAAGAGACAAAACCTACTCCAGCTCTTGCAAACATTCAAGCGGCTCAACGGCGGCCAGTTTCTCAACCCGTTAGACAAGCCTCAAGTTTGCAACCCAAAAGTACACCAAGGTCAAGCAAGGATGAAGATGATGATTTGTGGGGTGCCATAGCAGCTCCCGCCCCCAAAACAGCAAAAGCTATAAATTTTAAACCAAATGTAACTGATGATAACGATCCCTGGGCTGCCATTGCTGCTCCTGCACCCACTACCAAGGCCAAACCCTTATCTGCTGGCAGAGGTCGGGGAGCGAAACCTGCCGCTCCAAAATTAGGTGCTCAGCGGATAAACCGGACATCATCCTCTGGGGTGTAA	2424	0.448	MFKFLKEVVGGSGAGLKDLPYNIGEPYSCAWGSWLHCRGTSKDDGSAVSIFSLSGSSAQDGHLAAGRNGVKRLRTVRHPNVLSFLHSAEIETYDAGTPKVTIYIVTEPVMPLSDKIKELGLKGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHALDVLSEFDGSNDAASGQMLQYAWLVGTQYKPMELAKSDWAAIKKSPPWAIDSWGMGCLIYELFSGTKLAKTEELRNTVSIPKSLLPDYQRLLSSMPSRRLNTSKLIESEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPTLAEQLPRQIVLKKLLPVLASSLEFGSAAAPALTALLKMGSWLSDEEFRVKVLPSIVKLFASNDRAIRVGLLQHIDQYGESLSPQMVDEQVYPHVATGFSDTSAFLRELTLKSMLVLSPKLSQRTISGSLLKHLSKLQVDEEAAIRTNTTILLGNIATHLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRTKAFQAVDQFLQIAKQYYEKTNAADTTGGAGMGISSNPGNASLLGWAMSSLTLKGKPSDHAPVASASSSALTPSSSNASSAVDTPSTAPVRVSSTTDFAEHPAPFRVSSTPDFAEHHVPTSPTSTDGWGELENGIDGEHENDKDGWDDLEPLEETKPTPALANIQAAQRRPVSQPVRQASSLQPKSTPRSSKDEDDDLWGAIAAPAPKTAKAINFKPNVTDDNDPWAAIAAPAPTTKAKPLSAGRGRGAKPAAPKLGAQRINRTSSSGV*	808

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan4g0458	807	SUPERFAMILY	ARM repeat	292	551	IPR016024	-
	Lan4g0458	807	MobiDBLite	consensus disorder prediction	652	666	-	-
	Lan4g0458	807	Gene3D	Phosphorylase Kinase; domain 1	12	107	-	-
	Lan4g0458	807	MobiDBLite	consensus disorder prediction	704	807	-	-
	Lan4g0458	807	PANTHER	-	1	804	-	-
	Lan4g0458	807	MobiDBLite	consensus disorder prediction	595	691	-	-
	Lan4g0458	807	SUPERFAMILY	Protein kinase-like (PK-like)	38	287	IPR011009	-
	Lan4g0458	807	SMART	serkin_6	37	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan4g0458	807	ProSiteProfiles	Protein kinase domain profile.	2	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan4g0458	807	Gene3D	-	281	559	IPR011989	-
	Lan4g0458	807	MobiDBLite	consensus disorder prediction	600	632	-	-
	Lan4g0458	807	MobiDBLite	consensus disorder prediction	705	725	-	-
	Lan4g0458	807	Gene3D	Transferase(Phosphotransferase) domain 1	109	275	-	-
	Lan4g0458	807	MobiDBLite	consensus disorder prediction	670	691	-	-
	Lan4g0458	807	PANTHER	SCY1-RELATED S/T PROTEIN KINASE-LIKE	1	804	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan4g0458	Lan-Chr4	6942183	6953628	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan4g0458	70	290	MAP Kinase Kinase Kinase	AT5G66850	25.000	1.16e-07	53.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan4g0458	K08876		-	gmx:100792884	1327.38