Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0455 ATGGGTGAGAGGTCTGCTCCCCGTGATGGTCCAAGAACTATAGTTCGAATTAAGAGCCAAGATAATATACCTGATGATGGTTACACATGGCGTAAGTATGGACAAAAAATGGTCAAAGGAAATTCACACAGCCCTAGGTGCTACTACAGATGCACTTTCAGTGGATGCTATACAAGGAAACATGTGGAAAGGTGTGCTGATGATGCTAGATATGTGATAACCACCTATGATGGGAGGCATAATCATCAGGTGCCTCCACCCAAAGGAAAAATTCAGATGGATGAATTTTCTGAATTTCCAACACCATCTGAACAACCACTTGAATTGAACAACAATGAGACCTTTCCTTTTCCCAGTATGATTGCAACTCTCAGTGATCATTCAGAGTCTGCTTCCTCTGATACTCCTCATCATACTGCTGATGATGGATCTGTAATTTCAGCTTCTTCTGCCACTGATGCAGTGCTAAATTCACCATTTATATTTGACCTAAATCTTCCACCACCTCAGGAACATGATGATAGTGCCTCAACTGAGCCTCAGATTTGA 549 0.4189 MGERSAPRDGPRTIVRIKSQDNIPDDGYTWRKYGQKMVKGNSHSPRCYYRCTFSGCYTRKHVERCADDARYVITTYDGRHNHQVPPPKGKIQMDEFSEFPTPSEQPLELNNNETFPFPSMIATLSDHSESASSDTPHHTADDGSVISASSATDAVLNSPFIFDLNLPPPQEHDDSASTEPQI* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0455 182 MobiDBLite consensus disorder prediction 125 144 - -
Lan4g0455 182 Pfam WRKY DNA -binding domain 25 83 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan4g0455 182 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 6 102 IPR044810 GO:0003700
Lan4g0455 182 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 6 102 - -
Lan4g0455 182 SMART WRKY_cls 24 84 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan4g0455 182 SUPERFAMILY WRKY DNA-binding domain 18 85 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan4g0455 182 MobiDBLite consensus disorder prediction 162 182 - -
Lan4g0455 182 Gene3D WRKY domain 9 86 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan4g0455 182 ProSiteProfiles WRKY domain profile. 19 85 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0455 Lan-Chr4 6896042 6897530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0455 11 88 WRKY Transcription Factor Family AT5G07100 60.256 2.51e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan4g0455 WRKY 4.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0455 K13424 - lang:109344587 387.497