Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0453 ATGAAACTTTTGTACATGTTACATACTTATACATACATACTCATAATATATATACCTAAGTTTCTTCAATTATTCATTTCACACTCACGGAGAGGAAATAAGAGGAGAATGAGGATGACCAACCACAACTTACTAATATGTTTCACTACTTTATCACTCTACATCATTTTAAGTCCATGGATCTCTATTGAAGCTGCCCCTACACCCTCTCTTGTCACATACCTCCCTAACTTTAAGGGCACTTTTCCATCCAAGCACTATTCCGGATATATAAGCATTGATGGAAATGGTGAGAATGGGAAGAACTTGTTCTACTACTTTGTAAGTTCAGAAAGAAACCCAGAGAAGGATCCAGTTGTTCTATGGTTGAATGGGGGACCAGGGTGCTCAAGCTTTGATGGCTTCATTTATGAGCATGGACCATTCAACTTCGAGGCAGCCAAAACAAAAGGGAGTTTGCCCACCTTACATATCAATCCATACAGTTGGTCTAAGGTTTCGAGTATAATTTATTTGGATTCACCTGCTGGGGTTGGCCTATCTTACTCCAAGAATACCAGTAACTACATTACAGGGGACCTACAAACTGCGTCTGATACTCATGCATTCCTCTTCAAGTGGTTTGAGCAATTTCCTGAATTCCTTAATAACCCATTTTATATTTCTGGAGAGTCTTATGCTGGAATATATGTACCCACTTTAGCATATGAAGTAGTTAAAGGAATTAGGGGTGGTATTAAACCCGTGATCAACTTTAAGGGTTATATAATTGGAAATGGTGTCACGGATGGAAAATATGATGGCATTAACGCTCTAATTCCATTTGTGCATGGAATGGGCCTCATATCCGAGAATATCTACGAGGATTTACAAGCTTATTGCAAAGGACAGTACCACAATGATGATAATGTAAAGTGTAACGAGCATATCGAAAAGGTTTACACGGCTATTGATGGGCTTAACGTGTACGATATACTAGAGCCATGCTTCCATAACCCAGAAGCTGAAGCTGCCAAAGGAAATGGAACTAGTTTGCCATTGAGTTTCCAACAATTAGGGGCTACAGACAAGCCTCTACCTGTGAGAAAAAGGATGTTTGGTCGAGCTTGGCCCTTTCTAGCACCAGTTCAACAAGGCCTCCTCCCTTTATGGCCCCAATTATTGGCTCAAATTAGGCATGTCGATTGTGTTAACGATGAAGTAGCAAGTACATGGCTAAACAATGCACAAGTGAGGAAAGCCATTCATGCTGAGCAGGAAAAGGTGGCAGGTCCTTGGGAAATATGCACAGATAGGATACAGTATTATGGTAATGCTGGAAACAGCATGATTCCTTACCACAAGAACCTAACCAAATTGGGCTATCGAGCACTTATTTTCAGTGGGGATCATGATATGTGTGTTCCATTTACCGGAACTGAGGCTTGGACTCGTTCTATGGGATATAAGATTGTGGATGAATGGAGACCATGGACCTCTAATCACCAAGTTGCTGGATACTTGCAAGCATATGACAACAACCTCATTTTCCTCACCATCAAGGGAGCTGGACACACAGTCCCTGAATATAAGCCCAGGGAGGCACTGGATTTTTACACTAGATGGTTGGAAGGAAAACCAATATAG 1626 0.4108 MKLLYMLHTYTYILIIYIPKFLQLFISHSRRGNKRRMRMTNHNLLICFTTLSLYIILSPWISIEAAPTPSLVTYLPNFKGTFPSKHYSGYISIDGNGENGKNLFYYFVSSERNPEKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTKGSLPTLHINPYSWSKVSSIIYLDSPAGVGLSYSKNTSNYITGDLQTASDTHAFLFKWFEQFPEFLNNPFYISGESYAGIYVPTLAYEVVKGIRGGIKPVINFKGYIIGNGVTDGKYDGINALIPFVHGMGLISENIYEDLQAYCKGQYHNDDNVKCNEHIEKVYTAIDGLNVYDILEPCFHNPEAEAAKGNGTSLPLSFQQLGATDKPLPVRKRMFGRAWPFLAPVQQGLLPLWPQLLAQIRHVDCVNDEVASTWLNNAQVRKAIHAEQEKVAGPWEICTDRIQYYGNAGNSMIPYHKNLTKLGYRALIFSGDHDMCVPFTGTEAWTRSMGYKIVDEWRPWTSNHQVAGYLQAYDNNLIFLTIKGAGHTVPEYKPREALDFYTRWLEGKPI* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0453 541 SUPERFAMILY alpha/beta-Hydrolases 72 540 IPR029058 -
Lan4g0453 541 Gene3D - 443 538 - -
Lan4g0453 541 Gene3D alpha/beta hydrolase 65 352 IPR029058 -
Lan4g0453 541 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Lan4g0453 541 Gene3D - 396 434 - -
Lan4g0453 541 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 52 540 IPR001563 GO:0004185|GO:0006508
Lan4g0453 541 Pfam Serine carboxypeptidase 76 538 IPR001563 GO:0004185|GO:0006508
Lan4g0453 541 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 171 IPR001563 GO:0004185|GO:0006508
Lan4g0453 541 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
Lan4g0453 541 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
Lan4g0453 541 PRINTS Carboxypeptidase C serine protease (S10) family signature 508 521 IPR001563 GO:0004185|GO:0006508
Lan4g0453 541 PANTHER CARBOXYPEPTIDASE 52 540 - -
Lan4g0453 541 ProSitePatterns Serine carboxypeptidases, histidine active site. 508 525 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0453 Lan-Chr4 6807665 6814353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0453 401 541 Calmodulin-binding Proteins AT2G22960 47.518 1.31e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0453 K16296 - gmx:100790895 822.387