Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0431 ATGGCCATTCTTCAACGCCTATGGCGGTTACGTTCATTCCAAACCCTAACTTCTCATTCCTCACTTTCACGCACTCTTCCCCGTTCTTCCAATCACAATTCTGCACTTGCTCGTTTCACCGCTTCACAAGTTTCAAGTTCCAGAATTGTGCGTGAGGCTCAGGGATCATTTAAACATTCGATGCTTCCAGCTTTATTAGCTGGTACTTTTGGATTTGGATTAGTGGAAACGGCTTATGCAGATGATAGTGCTAATAATACTGAGGATGTGGAAGCAATTGCTGTTATAGAACGACACCGAATTGAGGAGTTGCTTAGAAGTAGAGGAATTCGATATGGTTCTTATCCTCGCTTCACTGTTGCTGTTAAAGGCCAAAAGGTCAGTATCAAGTTTCAAATTCCCCCTGCATGTGAAATCTCACAACTTATTGTGAATCTTACTGCAAATCTTGGACTGAAAGCTGAAGGGCATGGTGGTGGTTCAGATATGTCACTGCGTGCTTGGGATAGCACAGTTGCTTGGCAACTTACCCTTACCAATCCATCAAAGCAAAAACATATTCAAGAGAATGATTCATCTTCCACAGATATAAATGCACATGATGGAGATCTATGCGTACTCATATTTCATTCCCTCATTGGCTCAGATAAAGCTGAAATTGAATTTATTAAGAAAGGGAGCTTGAGTCCTGAAGAGCTTGATGCTTTTGTCTCTGTTTTACAATTAGCTAGTAACAAGACGGCACAAACAAACACCCTGGAAAAAAAGGCAAGGGAAGAGAACGAACAGGTCCCATCTGTGGATGTCTCTATTTCTAGTCTCGAGGCCATGGGAGTGATAATTTATGGCCTCAATGAACCCATAGGTATATCAAATGGTGAAATATTGTGGGACAACATCGCTGGGTATGAGCATCAAAAGCGAGTAATTGAAGATACAATACTATTGGCTCTGCATAGCCCTGAAGTATATGATGATATTGCCCGAGAGACTCGACATAAATTTGAATCAAACCGGCCTCGAGCTGTGCTTTTTGAAGGTCCACCAGGTACAGGGAAAACTTCATGTGCTCGTGTTATTGCTAATCAGGCGGGTGTCCCGTTGCTGTATGTTCCACTTGAGATAGTAATGTCTGAGTACTACGGCAAAAGTGAACGCCTTCTAGGAAAGGTGTTTTCTCTAGCAAATAGTCTTCCTAATGGTGCTATTATATTTCTGGATGAGGTTGATTCTTTTGCTGCTGCCCGCGATAGTGAAATGCATGAAGCTACACGAAGAATTTTGTCAGTATTACTGCGTCAGATAGATGGCTTTGAACAGGATAAGAAAGTGGTTGTTATTGCTGCTACAAATAGAAAGGAAGACCTTGATCCTGCATTAATCAGTCGTTTTGATACTATAGTCGCCTTTGGCTTACCCGATCATCAGAATCGTCAGGACATAGCATCCAAATATGCGAAGCACCTCTCCGAACCTGAACTAGATGAACTTGCAAGTGTTACAGAAAATATGTCAGGAAGAGACATTAGAGATGTTTGTTTGCAAGCGGAACGGTCCTGGGCATCAAAGATAATTCGAGGACAAGTATCTAAAGATGGGGAACGAGCGAAACTTCCACCATTGCAAGAGTATATAGTTTGCGCCACTAATAGGCAGGAAGCTTTGCGTCGCACTGCTGAAGACCGGAAGAACCGTACTTCTCGACAGAGGACCATAAGTGATTGA 1725 0.4249 MAILQRLWRLRSFQTLTSHSSLSRTLPRSSNHNSALARFTASQVSSSRIVREAQGSFKHSMLPALLAGTFGFGLVETAYADDSANNTEDVEAIAVIERHRIEELLRSRGIRYGSYPRFTVAVKGQKVSIKFQIPPACEISQLIVNLTANLGLKAEGHGGGSDMSLRAWDSTVAWQLTLTNPSKQKHIQENDSSSTDINAHDGDLCVLIFHSLIGSDKAEIEFIKKGSLSPEELDAFVSVLQLASNKTAQTNTLEKKAREENEQVPSVDVSISSLEAMGVIIYGLNEPIGISNGEILWDNIAGYEHQKRVIEDTILLALHSPEVYDDIARETRHKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEIVMSEYYGKSERLLGKVFSLANSLPNGAIIFLDEVDSFAAARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTIVAFGLPDHQNRQDIASKYAKHLSEPELDELASVTENMSGRDIRDVCLQAERSWASKIIRGQVSKDGERAKLPPLQEYIVCATNRQEALRRTAEDRKNRTSRQRTISD* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0431 574 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 67 558 - -
Lan4g0431 574 ProSitePatterns AAA-protein family signature. 444 463 IPR003960 GO:0005524|GO:0016887
Lan4g0431 574 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 67 558 - -
Lan4g0431 574 CDD AAA 325 472 - -
Lan4g0431 574 Pfam ATPase family associated with various cellular activities (AAA) 343 471 IPR003959 GO:0005524|GO:0016887
Lan4g0431 574 Gene3D - 473 556 - -
Lan4g0431 574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 294 525 IPR027417 -
Lan4g0431 574 SMART AAA_5 339 474 IPR003593 -
Lan4g0431 574 Gene3D - 294 559 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0431 Lan-Chr4 6483812 6490740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0431 339 539 Calmodulin-binding Proteins AT3G56690 36.364 1.50e-28 119