Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0424 ATGCTTATTACCTTCTTCCCTTTTTCTATCTTCCTTTCTTTCTCTTTCATCTTCTCACTTTTTCTACCTCTTTCAATCTCCAACACTGACCCATCTCATGTTCAAGCTCTCGGGGTCTTGTACAACGCGTTGAATAGTCCAACTGTGCTAACGGGTTGGAAAATTGGTGATGGTGATCCATGTGGAGAGTCATGGAAAGGGATAACCTGTGATGGTTCATCAGTTGTTTCGATTGAGCTCTCAGGTTTAGGACTCAATGGGACTCTTGGATACTTGCTTTCAGATCTTATGTCACTGCGAAAACTTGACTTAAGTGACAACAAGATCCATGACACGATTCCTTACCAGTTGCCGCCGAATCTTACCAGCTTGAATTTTGCAAGAAATAACTTAAGTGGAAATCTTCCTTATTCAATTTCTGCCATGACTTCACTCAATTATCTGAATGTCAGCAATAATGTGCTCTCCATGACAATTGGTGACATGTTTCAAACTCTTTCTGATCTGAGTACCTTGGATCTATCCTTCAATAGCTTTTCTGGAGATCTTCCTCCTTCATTTGCTTCATTGTCCAATCTTTCTTCTCTCCATTTGCAGAACAATCAGTTGACTGGCTCTCTTGTTGCTCTTGTTGGTTTGCCGTTGGATACTTTAAATGTCGCTAACAATAATTTCAGTGGATGGATACCTCATGAGCTTAGTTCCATCCCTAACTTCATATATGATGGAAACTCTTTTGCTAATGGTCCTGCTCCTCCTTCACCACCATCTACGTTGCCTCCGCCAAGTGGATCTCATAATACTCATCATCATTCAGGATCTGGTTCACATAATAAAACACGGGGTTCTGATAGTCATGGAAACTCCGATGGCCATAAGGTTTTGACAACAGGGGCCATTGTAGGCATTGTTTTTGGTTCAGTGTTGGCAGCTCTTATTGTGCTACTTGCTTTTGTTTTCTGTATCCAAAAGCAAAAAAAGAAGGAAAAGGGTGCAAGTACTTCTAGTGGGAGGCTTCCTCGTGGAATTACGAACGTAACTCCTCAGATGCAGGAGCAAAGGGTAAAGAGTGCTGCTGTTGTTACCGATCTCAAGCCTCCTCCTGCAGAAAATGTGATGATTGAGAGGGTACCTACAAAGAGTGGATCTGTAAGGCAAATGAAGTCCCCTATAACTTCCACATCATACACTGTCGCTTCTCTCCAAAGCGCAACAAATAGCTTTAGCCAAGAGTTTATTGTCGGTGAAGGTTCTCTTGGTCGAGTTTACAAGGCTGATTTCCCAAATGGAAAGATCATGGCTATTAAGAAGATTGATAACTCAGCACTTTCACTACAAGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCACGCTTGCGACATCCCAACATCGTTACACTGGCTGGATATTGTGCAGAGCATGGCCAACGACTTCTAGTTTATGAGTATATCGAGAATGGGAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGTAAGGATTTATCTTGGAATGCCCGTGTACGCATAGCACTTGGCACAGCCCGAGCTTTAGAGTACTTGCATGAAGTGTGCTTGCCATCTGTTGTTCATAGAAATTTCAAATCAGCAAATATACTACTTGATGAGGAGCTTAATCCTCACTTGTCTGACTGTGGTTTAGCTGCTCTAACTCCAAACACTGAGCGGCAGGTTTCAACTCAGATGGTTGGTTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCGGGGGTATACACTGTAAAAAGCGATGTTTACAGCTTTGGGGTGGTTATGCTGGAACTACTGACTGGTCGAAAACCACTTGACAGTTCACGGGCTAGACCAGAGCAATCACTTGTGAGGTGGGCAACACCACAGCTCCATGATATAGATGCTTTGGCCAAAATGGTTGATCCTGCTCTGAATGGCATGTATCCTGCAAAGTCACTTTCACGCTTTGCCGATATCATTGCCCTGTGTGTTCAGCCGGAACCCGAATTTCGACCTCCCATGTCTGAGGTGGTGCAAGCGTTGGTACGATTAGTCCAAAGAGCAAGTGTGGTTAAACGGCGACCAAGTGAGGAATCTGGTTTTGGTCACAAGACTCCAGATCATGAGGCCATAGACATGTCCTTTTAA 2151 0.4319 MLITFFPFSIFLSFSFIFSLFLPLSISNTDPSHVQALGVLYNALNSPTVLTGWKIGDGDPCGESWKGITCDGSSVVSIELSGLGLNGTLGYLLSDLMSLRKLDLSDNKIHDTIPYQLPPNLTSLNFARNNLSGNLPYSISAMTSLNYLNVSNNVLSMTIGDMFQTLSDLSTLDLSFNSFSGDLPPSFASLSNLSSLHLQNNQLTGSLVALVGLPLDTLNVANNNFSGWIPHELSSIPNFIYDGNSFANGPAPPSPPSTLPPPSGSHNTHHHSGSGSHNKTRGSDSHGNSDGHKVLTTGAIVGIVFGSVLAALIVLLAFVFCIQKQKKKEKGASTSSGRLPRGITNVTPQMQEQRVKSAAVVTDLKPPPAENVMIERVPTKSGSVRQMKSPITSTSYTVASLQSATNSFSQEFIVGEGSLGRVYKADFPNGKIMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIENGNLHDMLHFAEDSSKDLSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRARPEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSEESGFGHKTPDHEAIDMSF* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0424 716 Gene3D Ribonuclease Inhibitor 30 286 IPR032675 -
Lan4g0424 716 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Lan4g0424 716 MobiDBLite consensus disorder prediction 250 290 - -
Lan4g0424 716 MobiDBLite consensus disorder prediction 696 716 - -
Lan4g0424 716 PANTHER OS01G0253100 PROTEIN 27 712 IPR045271 GO:0004714|GO:0006468
Lan4g0424 716 Gene3D Phosphorylase Kinase; domain 1 371 485 - -
Lan4g0424 716 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Lan4g0424 716 CDD STKc_IRAK 414 685 - -
Lan4g0424 716 ProSiteProfiles Protein kinase domain profile. 408 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0424 716 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 27 712 - -
Lan4g0424 716 SUPERFAMILY Protein kinase-like (PK-like) 383 682 IPR011009 -
Lan4g0424 716 SUPERFAMILY L domain-like 35 238 - -
Lan4g0424 716 Pfam Leucine rich repeat 151 203 IPR001611 GO:0005515
Lan4g0424 716 Pfam Protein kinase domain 411 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0424 716 Gene3D Transferase(Phosphotransferase) domain 1 486 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0424 Lan-Chr4 6407438 6413211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0424 142 716 Strubbelig Receptor Gene Family AT4G22130 70.415 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lan4g0424 Pkinase 4.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0424 - - gmx:100781455 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0424 4 6407438 6413211 Lan19g0694 19 13021614 13026780 LSH