Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0418 ATGGCTATGGGAGATACATTGCCATTGATTCATAAGGTTGGGCTTCCTCCGAAGCAGACTCTTTTCGAAGAGTTGAAGCATAATATGAAGGAAATTTTCTTCTCAGACAACCCTTTAAGCAAATTTAAGAACCAAAGTGGATCCAGAAAGTTTGTTCTAGGATTGCAAGCAGTGTTTCCTATTTTTGATTGGGGAAGAAGTTACAATCTTAAAACATTCAGAGATGATTTCATTGCTGGACTTACCATTGCAAGTCTCTGTATTCCTCAGGATATTGCATATGCAAGCCTTGCAAATTTGGACCCTCAATATGGACTATACACCAGCTTTGTGACTCCTCTTGTGTATGCTTTCATGGGAAGCTCGAGAGATATCGCCGTTGGACCCGTATCAGTCGTATCTCTCTTGCTTGGAACTATGCTTAGTGAAGAGATCAGTGACTACAAAAGTCATGAATATCTGAGGCTTGCATTTACTGCTACCTTCTTTGCAGGAATTACTCAACTGACGCTAGGAGTTTTAAGGCTTGGTTTCTTGATTGACTTCATCTCTCATGCAGCCATTATGGGATTCATGTCTGGAGCAGCCATTACTATTGCACTGCAACAGCTTAAAGGCCTGCTTGGCATACAAAAATTCACTAAGAAAACTGATATTGTTTCTGTCATGCGCTCGGTTTGGAGTGCAGTGCACCACGGGTGGAATTGGCAGACAATGGTGATTGGATTAGCATTCTTGGTCTTCCTTCTTATAACCAAGTACATTTCTAAGAAGAACAAGAAACTCTTTTGGGTAGCAGCAATTTCTCCTATGATCTCTGTCATACTATCTACACTTTTTGTGTACATTACAAGGGCTGACAAGAAAGGTGTAGCAATTGTGAGACACATTAAAAAGGGTGTGAATCCATCATCTGTTAGTGAAATTTTTTTCAGTGGAAAATATCTCGGTCCGGGTATTCGGATTGGTGTGGTAGCTGGGATGGTAGCACTCACTGAAGCTGCTGCTATTGGGAGAACATTTGCTGTCATAAAAGACTATTCATTGGATGGTAACAAAGAAATGTTGGCTATGGGTACAATGAATGTTATTGGTTCATTCACATCATGTTATTTAGCTACAGGATCATTTTCTCGAACAGCAGTGAACTTTATGGCTGGTTGCAAAACTGCTGTATCAAACATTGTTATGTCCAGTGTTGTGTTGTTAACTTTGATACTCATCACACCACTATTCAAGTACACTCCAAATGCAGTACTTTCTTCTATTATAATAGCTGTGGTGCTAGGCTTTGTGAACATTGAAGTTGTTCTTCTGCTATGGAAGATCGATAAATTCGACTTTCTTGCTTGCATGGGAGCCTTCTTTGGTGTGATCTTCAAAAGTGTTGAGATTGGCCTTCTAATTGCAGTGGTAATATCTTTTGCTAAAATCCTTTTACAAGTGACAAGGCCAAGAACTGTAGTACTTGGAAAAGTTCCAGGGACTAATGTTTATAGGAACATTCAGCAATACCCCAAAGCAACTCAGATTTCTGGCATGTTAATTATCAGGGTTGACTCTGCAATCTACTTCTCAAATTCCAACTATATCAAGGAGAGAATTTTGAGATGTTTGGCTAATGAAGATGCTCAAAGGAAAGGAAGTGCATTAACCAGAATACTGTATCTCATTGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGCATCCATGCATTTCAAGAGTTATATAAGAGCCTTCAGAAAAGAGAAGTACAGCTTGTGTTGGCAAACCCAGGACCAACTGTAATGGAGAAGCTCCATGCATCCAATTTAACTGAGTTAATTGGAGAACATAAAATATTTCTATCAGTGACTGATGCTGTTGCAACTTTTGGTACAAAGGATGAACAATTATAA 1905 0.3927 MAMGDTLPLIHKVGLPPKQTLFEELKHNMKEIFFSDNPLSKFKNQSGSRKFVLGLQAVFPIFDWGRSYNLKTFRDDFIAGLTIASLCIPQDIAYASLANLDPQYGLYTSFVTPLVYAFMGSSRDIAVGPVSVVSLLLGTMLSEEISDYKSHEYLRLAFTATFFAGITQLTLGVLRLGFLIDFISHAAIMGFMSGAAITIALQQLKGLLGIQKFTKKTDIVSVMRSVWSAVHHGWNWQTMVIGLAFLVFLLITKYISKKNKKLFWVAAISPMISVILSTLFVYITRADKKGVAIVRHIKKGVNPSSVSEIFFSGKYLGPGIRIGVVAGMVALTEAAAIGRTFAVIKDYSLDGNKEMLAMGTMNVIGSFTSCYLATGSFSRTAVNFMAGCKTAVSNIVMSSVVLLTLILITPLFKYTPNAVLSSIIIAVVLGFVNIEVVLLLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVVISFAKILLQVTRPRTVVLGKVPGTNVYRNIQQYPKATQISGMLIIRVDSAIYFSNSNYIKERILRCLANEDAQRKGSALTRILYLIVEMSPVTDIDTSGIHAFQELYKSLQKREVQLVLANPGPTVMEKLHASNLTELIGEHKIFLSVTDAVATFGTKDEQL* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0418 634 PANTHER SULFATE TRANSPORTER 3 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan4g0418 634 ProSiteProfiles STAS domain profile. 504 627 IPR002645 -
Lan4g0418 634 SUPERFAMILY SpoIIaa-like 506 627 IPR036513 -
Lan4g0418 634 CDD STAS_SulP_like_sulfate_transporter 505 620 - -
Lan4g0418 634 Pfam STAS domain 505 623 IPR002645 -
Lan4g0418 634 ProSitePatterns SLC26A transporters signature. 102 123 IPR018045 GO:0008271|GO:0008272
Lan4g0418 634 Gene3D STAS domain 484 631 IPR036513 -
Lan4g0418 634 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 3 631 - -
Lan4g0418 634 TIGRFAM sulP: sulfate permease 60 623 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan4g0418 634 Pfam Sulfate permease family 73 452 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0418 Lan-Chr4 6374574 6379185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0418 8 630 Inorganic Solute Cotransporters AT1G22150 69.712 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0418 K17470 - gmx:100784124 1017.68