Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0412 ATGAGTAACAAGAACCATGCAACTGATGCAAACATTGGCAACAATGGCCAGCAAGGGGTTAGACGTGAGAATCCTAAGGTAGAGTTCTCTGAAGATGAGGAAGATATCATTGCCAAGATGTTTAGATTGGTTGGAGAGAGATGGTCTCTTATTGCTGGAAGAATTCCGGGAAGAACTGCGGAAGAGATTGAAAAGTATTGGACTACAAAGTTTGGTTCAACGAGTGACCAATGTTCATCTACTGATGATTAA 252 0.4127 MSNKNHATDANIGNNGQQGVRRENPKVEFSEDEEDIIAKMFRLVGERWSLIAGRIPGRTAEEIEKYWTTKFGSTSDQCSSTDD* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0412 83 Gene3D - 28 71 - -
Lan4g0412 83 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Lan4g0412 83 MobiDBLite consensus disorder prediction 1 30 - -
Lan4g0412 83 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 3 76 - -
Lan4g0412 83 SUPERFAMILY Homeodomain-like 28 70 IPR009057 -
Lan4g0412 83 MobiDBLite consensus disorder prediction 1 21 - -
Lan4g0412 83 SMART sant 25 73 IPR001005 -
Lan4g0412 83 CDD SANT 28 69 IPR001005 -
Lan4g0412 83 Pfam Myb-like DNA-binding domain 26 68 IPR001005 -
Lan4g0412 83 PANTHER AND CPC, PUTATIVE-RELATED 3 76 - -
Lan4g0412 83 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 75 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0412 Lan-Chr4 6322247 6322967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0412 29 71 MYB Transcription Factor Family AT3G13540 60.465 3.16e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan4g0412 Myb_DNA-binding 6.2e-10 CL0123