Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0387 ATGATGGCTGATCAGAGAAAAAAGTCCTCTGTGGATGTAGACTTCTTTACTGAATATGGTGAAGGGAACAGATACAGAATTGAGGAAGTAATTGGTAAAGGGAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTCGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCCACTCGCATTCTTCGAGAAATCAAGCTTCTTAGACTCTTGCGTCATCCAGATATAGTGGAGATCAAGCATATTTTGTTACCTCCTTCAAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTGCATCAAGTCATCAAAGCTAATGATGATCTGACTCCAGAACATTACCAGTTTTTCCTCTATCAGCTTCTTCGTGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTTAATGATACACCCACTGCTATATTCTGGACCGATTATGTTGCAACAAGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCTATAGATATATGGAGCATTGGCTGCATTTTCGCAGAACTTTTAACTGGAAAACCTCTTTTCCCTGGGAAGAATGTAGTCCATCAACTGGACCTCATGACTGATCTTCTTGGAACACCGTCGCTTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAAGAAGAATCCCATTCCTTTCTCCCAGAAGTTTCCTTATGCAGACCCTCGTGCACTTCGTTTATTACAGAGAATGTTGGCATTCGAGGCTAAGGATCGTCCTACTGCTGAAGAGGCCCTGGCTGATTCGTATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCTTCTGCTCAGCCAGTCACCAAGATGGAATTTGAATTTGAGAGACGTAGGATAACGAAGGAAGATGTACGAGAGCTTATATACCGAGAGATTCTGGAGTACCACCCGCAGATGTTAAAGGAGTTTCTAGAGGGAGCAGAGCCAACAGGTTTCATGTATCCAAGTGCTGTGGACCAGTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTACGGCAAAGGTGGAACTGCTGCTCCACCTGAAAGGCAGCATGCATCTTCATTACCCAGGGCATGTGTGTTGTACTCGGATAACAAAATACAAAATACGACTGAGGTCACAGATGATCTATCCAAGTGTTGCATCAAAGAAGTTGGGGAACCACCCATAGATAGGAGAACCGGTGTGCAAGCTCCTCACAACGTTCAAGGTGTTGCTGCCAGGCCCGGAAAAGTTGTCGGTTCAGTGACGCGTTACAGCAACTGTGGGGTGGCAATGACGGCAGAGGCTGAACCACGGAGGGGGATTAGGAACCCATCTGTTTCAGCTCAGAATGCTGCGTCAAGCTATCCTCGAAGAAACCCGAGTTCTAAAAATGAAGGCGGAAGATGA 1566 0.4393 MMADQRKKSSVDVDFFTEYGEGNRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSLEAIARVRNEKARRYLSSMRKKNPIPFSQKFPYADPRALRLLQRMLAFEAKDRPTAEEALADSYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPQMLKEFLEGAEPTGFMYPSAVDQFKKQFAYLEEHYGKGGTAAPPERQHASSLPRACVLYSDNKIQNTTEVTDDLSKCCIKEVGEPPIDRRTGVQAPHNVQGVAARPGKVVGSVTRYSNCGVAMTAEAEPRRGIRNPSVSAQNAASSYPRRNPSSKNEGGR* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0387 521 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Lan4g0387 521 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0387 521 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Lan4g0387 521 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Lan4g0387 521 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0387 521 MobiDBLite consensus disorder prediction 496 521 - -
Lan4g0387 521 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0387 521 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 467 - -
Lan4g0387 521 MobiDBLite consensus disorder prediction 486 521 - -
Lan4g0387 521 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan4g0387 521 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 467 - -
Lan4g0387 521 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Lan4g0387 521 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0387 Lan-Chr4 6079969 6085164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0387 1 519 MAP Kinase Gene Family AT5G19010 81.308 0.0 881
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan4g0387 Pkinase 2.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0387 - K04371 gmx:100781957 950.273