Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0379 ATGATAGTGATGGAGAACCCTGTAGGTACTGAACTGGCAATGAGTAATGCCAATGTGGAGGAGGAAATAGATTTTTCCTGTGAGCCATATATAGGGTTGGAATTTGATTCGTCAGATGATGCGCTTAAGTTTTACACATCATATGCAAGTCGAACAGGATTTAAAGTTCGGATTGGTCAGCTGTATCGATCAAGAACTGATGGGTCGGTTTCTTCACGAAGGTTCGTGTGCTCAAAGGAGGGATTTCAGCTAAGTTCAAGAACAGGTTGCTCAGCGTTCATAAGGGTACAAATAAATGCTTCTGGAAAGTGGGTTGTTGATCATTTCCATAAGGACCACAATCACAATCTTGACACTGAAGGGGAAAATTGCAATCCAACTTCACAGCAGAGGGGTGTTACAGCTATCAATTCTTTTGTTGAAGTGCCCCGCAGGCCAAGGAAAAAATTGATTGCAGAATCCAATAATGAACCCTCTTCTCCCTTCGGAATTATTGATTTAAAGCGTCTGAGAAGGGAAGAATCGGAAGGACAGCCCATAACTGAACCATATGTCGGACAAGAGTTTAATTTGCCTAATGAAGCCTACCAATTTTATCGTGCATATGCAGCATATGTGGGTTTTGGAGTTCGAATTGGTCAATTGTTCCGTTCAAAGAATGATGGGTGGATTACATCCCGCCGATTTGTGTGCTCAAAAGAGGGGTTCCAGCACCCATCAAGAGTAGGTTGCGGAGCTTATTTGAGGATTAAGAGACAACCATCAGGAAAATGGGTAGTGGACCGTCTAAGAAAAGATCATAATCATGATCTGGACTCTGCAGGGGACGGTAGGACAAAAGGTCTTCCTGCTCCTAATATTTTGACTGAGGAGGTACATGCTGGGTCGGTAAATGGTGATTTGTTTAAGCTAGATAACTACCCTGTCACTAGAGGGGTTAGACAAAATCACATCAAAAGTGATTGGTACAGTGTGCTTTTAGAGTATTTCCAATCGAGACAAGCAGAAGATACTGGTTTCTTTTATGCTGTGGAAGTTGATAATGGTAATTGCATGAGCATATTTTGGGCTGATGGCAGATCTAGATATTCATGTAGTCAATTTGGTGATGTCCTTGTTATAGACACATCATACCGAAAAAGTGTCTATTTGGCACCATTCGCTACCCTTGTTGGACTTAACCATCATAAGCAACCTGTGCTTCTTGGTTGTGCTCTAATTGCTGATGAATCCGAAGAATGTTTCACTTGGCTGTTTCAAACATGGCTGAGGGCAGCATCTGGCCGACAGCCGCTGGCAGTAATAGCTGATCAAGACATGGCAATCCAGAGTGCGATAGCAAAAGTCTTTCCAGGAACCTCTCATCGCTTTTCATTGTGGCAAGTTAAGGCAAAGGAACAAGAGAATCAGGGTCTTTTTGGTCATGAATTTACCGAAGATTATGGAAAGTGTGTTTACCTAAGTCAGACAGTTGAAGAATTTGACACAAGATGGAATGCCCTACTCAACAAATATGGATTGAAGGACAATGTTTGGCTAGAAGAAATGTATGAGAAGCGTGAATCCTGGGTTCCATTATATTTAAGGGGCATATTTTTTGCGGGCATACCCATGAATGAAAGCGTTGAATCATTTTTTGGTGCATTTTTGAATGCCCAAACACCTCTCATGGAGTTCATTCCAAGGTATGAAAGAGGTCTTGAGCGACGACGCGAGGAAGAAAGAAAAGAGGATTTTAATACTTCTAATTTTCAACCCCTTTTGCAAACAAAAGAACCAGTAGAAGAACAATGTAGAAGGCTATACACTCTTACCTTATTCAAAGTATTTCAGAATGAGCTTTTGCAGTGCTATAGTTATCTCGGGTTTAAAATTTATGAAGAAGGCCCCCTCAGAAGATACTTGGTACGTAAGGGTGGAAATGATATGGAGAAGCATATCATTACATTTAATGCATCCAATCTCGTCATTAGTTGTAGCTGCCAGATGTTTGAATATGAAGGTGTTCTTTGTAGACATGCTTTGAGGGTTTTGCAGATACTGGAGTTAAGAGAAGTTCCTTCTCGCTACATCTTACACCGATGGACAAGAAACGCTGAGGATGGTGTTTTTCCTGATACAGAGTCATGGAGTAGTTCTCAAGAACTCAGGAATTTGATGCTATGGAGTCTAAGAGAAACTGCATCTAAATATGTAGATGCTGGTGCATCCTCTATCGAAAAGTATAAACTTGCCTATGAGATTTTGCGGGAGGGTGGTAGAAAGCTATGTTGGCACAGGTGGCACATGGAATGGATTATAGCTATTCAACACAGCACATACTCACTTTAA 2331 0.4131 MIVMENPVGTELAMSNANVEEEIDFSCEPYIGLEFDSSDDALKFYTSYASRTGFKVRIGQLYRSRTDGSVSSRRFVCSKEGFQLSSRTGCSAFIRVQINASGKWVVDHFHKDHNHNLDTEGENCNPTSQQRGVTAINSFVEVPRRPRKKLIAESNNEPSSPFGIIDLKRLRREESEGQPITEPYVGQEFNLPNEAYQFYRAYAAYVGFGVRIGQLFRSKNDGWITSRRFVCSKEGFQHPSRVGCGAYLRIKRQPSGKWVVDRLRKDHNHDLDSAGDGRTKGLPAPNILTEEVHAGSVNGDLFKLDNYPVTRGVRQNHIKSDWYSVLLEYFQSRQAEDTGFFYAVEVDNGNCMSIFWADGRSRYSCSQFGDVLVIDTSYRKSVYLAPFATLVGLNHHKQPVLLGCALIADESEECFTWLFQTWLRAASGRQPLAVIADQDMAIQSAIAKVFPGTSHRFSLWQVKAKEQENQGLFGHEFTEDYGKCVYLSQTVEEFDTRWNALLNKYGLKDNVWLEEMYEKRESWVPLYLRGIFFAGIPMNESVESFFGAFLNAQTPLMEFIPRYERGLERRREEERKEDFNTSNFQPLLQTKEPVEEQCRRLYTLTLFKVFQNELLQCYSYLGFKIYEEGPLRRYLVRKGGNDMEKHIITFNASNLVISCSCQMFEYEGVLCRHALRVLQILELREVPSRYILHRWTRNAEDGVFPDTESWSSSQELRNLMLWSLRETASKYVDAGASSIEKYKLAYEILREGGRKLCWHRWHMEWIIAIQHSTYSL* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0379 776 Pfam MULE transposase domain 371 463 IPR018289 -
Lan4g0379 776 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 21 121 IPR031052 GO:0006355
Lan4g0379 776 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 147 757 IPR031052 GO:0006355
Lan4g0379 776 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 147 757 - -
Lan4g0379 776 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 21 121 - -
Lan4g0379 776 Pfam FAR1 DNA-binding domain 197 271 IPR004330 -
Lan4g0379 776 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
Lan4g0379 776 SMART 26again6 657 684 IPR006564 GO:0008270
Lan4g0379 776 ProSiteProfiles Zinc finger SWIM-type profile. 644 682 IPR007527 GO:0008270
Lan4g0379 776 Pfam SWIM zinc finger 642 679 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0379 Lan-Chr4 6040364 6045160 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan4g0379 MULE 4.2e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0379 - - lang:109345299 1580.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0379 4 6040364 6045160 Lan19g0657 19 12427968 12431067 LSH