Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0376 ATGGGTTGTGTTCATGGTAAGTGTTGTGGCAAGTACCCTACACCATCAGAGGGTGGTTCTGAACTTGGCCCTTACCATGCCCAAAGGAAGCACATACTTACCCAGAGAGCACTTGAGCTTGTTCCTGTTCCTTCCCACAACCTCACTTTGGAGTACTCAGTTCTCACTCAGAGGGGATACTATCCTGACTCACCAGACAAAGCAAACCAGGATAGTTTCTGCATTAGGACACAAATTCAAGGTAATCCAAATGTTCACTTCTTTGGTGTGTATGATGGGCATGGTCAATTTGGTAGCGAGTGTTCAAGTTTTGTTAAGGATAGTTTGGTAGAGACATTGTCACATGATCCTGTGTTGTTGGAGGATCCGGTTAATGCCTATACTTCGGCGTTTTTGACAACAAATTATGAATTGCATAATAGTGAGGTTGATGATTCTATGAGTGGCACTACTGCAATTACGGTGCTTGTTATTGGAGACACCCTGTATGTTGCTAATGTTGGTGATTCGAGAGCAGTGCTAGCTGTTAAGGATGGAGATCGCATTGTTGCTGAGGACTTATCATCTGATCAGACACCATTTCGGAGAGATGAATGTGAGAGGGTGAAACAATGTGGGGCAAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCTTAAGGATCCCAATATCCAGACTTGGGGGGATGAAGAGACTCAGGGTGGTGATCCTCCACGGTTGTGGGTTCCAAATGCGATGTATCCTGGAACTGCTTTTACAAGGAGTGTCGGGGATAATTTGGCCGAGACAATTGGTGTCATTGCTGTTCCAGAGGTCTCAACGGTTCGGCTTACACCGAATCATCTTTTCTTTGTTGTTGCAAGCGACGGCATATTTGAGTTCCTATCAAGTCAAAGTGTTGTTGATATGGCAGTCAGCTTTTCAGATCCCCGAGATGCTTGTGCTGCCATTGCTGGAGAGGCATATAAACTATGGTTAGAACATGAGAATCGGACAGATGATATAACGATTATCATTGTTCAAATCAAAGGCCTGTCCAATTCAGGTACATCTCGAGTTGGACCAAGTGAGATCAATGTCAGTACTGTAATGAGGGCCAAGAGGGGGAAGGGAATTTCTGAGGTATCTGCTACCACAGGGTCAGATGTTTCTCGTTCTGTGAGGAGTGGTTACTCTGATTTACAGTCCTATCAGCATTTGGTCTCAATCAGAAGCCCGGCTATAGTTGTCCCCTCACCAACATGTCAAAGACCAATTGAATTGTGA 1263 0.4505 MGCVHGKCCGKYPTPSEGGSELGPYHAQRKHILTQRALELVPVPSHNLTLEYSVLTQRGYYPDSPDKANQDSFCIRTQIQGNPNVHFFGVYDGHGQFGSECSSFVKDSLVETLSHDPVLLEDPVNAYTSAFLTTNYELHNSEVDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGDRIVAEDLSSDQTPFRRDECERVKQCGARVLSVDQVEGLKDPNIQTWGDEETQGGDPPRLWVPNAMYPGTAFTRSVGDNLAETIGVIAVPEVSTVRLTPNHLFFVVASDGIFEFLSSQSVVDMAVSFSDPRDACAAIAGEAYKLWLEHENRTDDITIIIVQIKGLSNSGTSRVGPSEINVSTVMRAKRGKGISEVSATTGSDVSRSVRSGYSDLQSYQHLVSIRSPAIVVPSPTCQRPIEL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0376 420 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Lan4g0376 420 ProSiteProfiles PPM-type phosphatase domain profile. 51 341 IPR001932 -
Lan4g0376 420 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 29 415 - -
Lan4g0376 420 Pfam Protein phosphatase 2C 80 321 IPR001932 -
Lan4g0376 420 CDD PP2Cc 67 341 IPR001932 -
Lan4g0376 420 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 29 415 - -
Lan4g0376 420 Gene3D - 41 343 IPR036457 -
Lan4g0376 420 SMART PP2C_4 47 339 IPR001932 -
Lan4g0376 420 SUPERFAMILY PP2C-like 38 343 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0376 Lan-Chr4 6011211 6015058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0376 1 346 PP2C-type Phosphatase Gene Family AT3G06270 73.066 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0376 - - aprc:113872580 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0376 4 6011211 6015058 Lan16g0437 16 4320353 4340136 LSH