Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0369 ATGAAAGATGAAGGAGAATCACAACCTTCCCCCAGAAATGATGACCACAAGTCTGAAAAGAAACAAGTAGTGAAAAAGGAGAGCAATTCTGTAAGAGGCAGAAGACTAAGAACTGGATTTTCTGATTCATTTTCAACCATTGACTTGGGAGGTTTAGATATTGAAGAGGGACACCAATCTGAGAACTATTCTAGTCCTAGAACTCTAGAACCTGGAAACCATTCTTCAAGGGCAAGCACTTCTCATTCAGAGGGTCATCCAGATTTGACAGGTGCTGGAAATAATCAGTGGCATCAAGGTTTCTTTAAGTTACTGAAGAAAGGATCACAAATGCCATTCCATACTTTTCATCCACTTAAAAATGTTCAAAAGCTCACAAGGAGAAAGAGTAAAAGAATTAGGGAGGACTTGATTCCTTCTCTTAGTTCTCCTGCTCTTAAGTCATCTTTGGATAGTGAGTTTTGCTGCTTTAAATCTTCATGGAAAAATTTCAGTCTTTCTGAGATTCAGGCTGCAACTAATGACTTCACACATGATAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTACTTAGGAAAATTGGAAGATGGTAACTTTGTTGCCATTAAAAAGTTGACAAGAGGGAGCCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGTTGGGCATTATAGTGCATGTGGACCACCCGAATATTGCTAGATTGATTGGATATGGTGTTGAAGGTGGAATGTTTCTTGTTCTTCAGTTGTCTCCACATGGGAGTCTATCATCCATACTTTATGGACCTAGAGAGAAACTGGATTGGAGCTTAAGGTATAAGATTGTTCTGGGGACTGCCGAGGGCCTCCGCTATCTGCATGAAGAATGCCAAAGAAGGATCATTCACAAAGATATCAAGGCTTCTAATATACTTCTCTCAGAGGATTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTGCCTGACCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACCTTTGGTTACCTTCCTCCTGAATTCTTCTTGCATGGTATAGTAGATGAAAAGACTGATGTATATGCTTATGGTGTGCTATTATTGGAGCTTATTACTGGAAGACAAGCTTTGGATAGCTCACAGAAAAGTCTTGTGATGTGGGCCAAACCTTTGCTATCTGCAAACAATATCAAAGAGCTTGTTGATCCAGTTTTGGCTGATGCTTATGATGAAGAGCAAATGAAACTTGTAATCTTAACAGCTTCTCTATGTATAGAACAGTCTTCAATTCATCGACCGCACATGAACCAGGTATTAAAGATACTAAGAGGTGAAGAAGAGAGCTTGATGATGATAAAGGGACGTCAGAGATCGAAACTTCAAAGGACATACTCAGTTGAACTGAATGATGCAGAAGATTACAACTCAACCAAGTTTTTGAATGAGAGGGATAAATACATGGAGACTATTCTAGGATCCAGTATCTCTATAAAAAAAGAAAGCAATGAAAACTAG 1512 0.3955 MKDEGESQPSPRNDDHKSEKKQVVKKESNSVRGRRLRTGFSDSFSTIDLGGLDIEEGHQSENYSSPRTLEPGNHSSRASTSHSEGHPDLTGAGNNQWHQGFFKLLKKGSQMPFHTFHPLKNVQKLTRRKSKRIREDLIPSLSSPALKSSLDSEFCCFKSSWKNFSLSEIQAATNDFTHDNLIGEGGYAEVYLGKLEDGNFVAIKKLTRGSQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLDWSLRYKIVLGTAEGLRYLHEECQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFLHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSANNIKELVDPVLADAYDEEQMKLVILTASLCIEQSSIHRPHMNQVLKILRGEEESLMMIKGRQRSKLQRTYSVELNDAEDYNSTKFLNERDKYMETILGSSISIKKESNEN* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0369 503 Gene3D Phosphorylase Kinase; domain 1 140 250 - -
Lan4g0369 503 PANTHER OS08G0249100 PROTEIN 25 479 - -
Lan4g0369 503 Gene3D Transferase(Phosphotransferase) domain 1 253 466 - -
Lan4g0369 503 SMART serkin_6 176 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0369 503 SUPERFAMILY Protein kinase-like (PK-like) 161 456 IPR011009 -
Lan4g0369 503 MobiDBLite consensus disorder prediction 1 43 - -
Lan4g0369 503 MobiDBLite consensus disorder prediction 1 33 - -
Lan4g0369 503 MobiDBLite consensus disorder prediction 58 93 - -
Lan4g0369 503 MobiDBLite consensus disorder prediction 56 93 - -
Lan4g0369 503 Pfam Protein kinase domain 177 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0369 503 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 25 479 - -
Lan4g0369 503 ProSiteProfiles Protein kinase domain profile. 176 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0369 503 ProSitePatterns Protein kinases ATP-binding region signature. 182 205 IPR017441 GO:0005524
Lan4g0369 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0369 Lan-Chr4 5947590 5951290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0369 147 495 Receptor kinase-like Gene Family AT1G53420 38.936 6.93e-73 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan4g0369 Pkinase 1.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0369 - - lja:Lj6g3v1915960.1 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0369 4 5947590 5951290 Lan19g0653 19 12354392 12359612 LSH
Lan4g0369 4 5947590 5951290 Lan16g0441 16 4361983 4366534 LSH