Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0366 ATGAACCAGTACCATATCTACGAAGCCATTGGTCGCGGAAAATACTCCACTGTGTACAAAGGTAGGAAGAAGCAGACAATTGAGTATTTCGCCATCAAAAGCGTCGATAAATCACAGAAATCCAAGGTCCTTCAAGAAGTTAGGATTCTTCACTCTTTGGATCACCAAAATGTACTGAAGTTCTATTCTTGGTATGAAACTTCTGCTCACCTATGGTTGGTATTGGAGTATTGTGTTGGGGGAGATCTGCTTTCCATATTACGGCAGGATACTCAACTTCCTGAAGATTCAGTTCATGATCTTGCTTTTGACCTAGTCAAGGCTTTGCAGTTTTTACATTCAAATGGAATAATATATTGTGACCTGAAACCATCAAATATCCTACTGGATGAAAATGGACATACGAAGCTATGTGATTTTGGGTTGGCTAGAAAGTTAAGAGATATATCAAAAGCTCCTTCTTCCTCGTTGCCTCAAGCAAAACGTGGAACACCCTCTTACATGGCTCCAGAGCTTTTTGGGGATGGTGGAGTTCATTCTTATGCTTCTGATTTCTGGGCCCTGGGCTGTGTACTATATGAATGTTATGCTGGGAAGCCTCCCTTTGTGGGAGGAGAATTCACTCAGCTTGTTAAATCCATTATTTCAGATCCAACTCCCCCTCTCCCTGGTAATCCTAGTCAACCTTTTGTTAATTTAATTAATTCTCTGCTGGTAAAAGATCCAGCTGAAAGAATACAGTGGCCCGAGCTTTGTGGTCATGCATTTTGGAGAACCAAATTGAGTGTGATGCCTCTGCCTGCTCAACCTGCATTTGATGATATGATAGAGCTACAAGCTAAACCATGCTTATCAGTACGGAATGGTGATAAACCATCTCTTGACAGGACCCCTCTCAAATATCGTGAAAAAGATGTGAAAGGGGGCATTGACACACCAACAAGGGCAATAACAAATGGCCACAGAACTCAGACGAAAGGTTCTGGCAAAACAGTTGAGGTGAAGCAGAAAGGTCCATCCAAAATAAGCAAGGTTGTGAATCTTTTGAGACTATCAAGAATAGCAAAATCAAATTTGCAAAAAGAAAATGAGAAGGAAAACTATCGACGCCCCTTGCCTAATAGCTCTGAGATAGACTCTGAAGTTAAAATTGAGAACACCGACATGGAACTTGATTTTAATGAGAGCATCGAAGATGATGCACCTGAAAAAACTGATGGCTCAGAACATGCAACTTCTGTACCTGATGAGAAAATGGACAATCATGATCAGAAACAGGGTAAAACAGATGAGTTTGAAAATGATATACACCAGCTGGGCACTTCACCTGTTGTTAACACACCTGTTTCAAATGATCCAAGGTCATTTGATCATGAGTCAACTCCTGATTATCCTGACATATCTGCTATTTCTCCCAGTGTGAGCCCTCAGGTGAAGAAACATAGAGTTAAAGAAGAAGCAGGGTCGGGCCTTGACTCTGATTATTCAAGGTTGTCTAACAACCTCTCTGAAGTTCTTTGGCATCCATCTGATCTCTCAGTCAGACCTGTAATGCCCAGCAGAAAAGTTGATAAAGTCTCAGATCTCATTCCTTCACTTCCTTTTCAGGCTTTGCAAGCATTTGATTTTGTCAAGTTGCCTAAAGAGCAATTGGAGGAAATCCAAAACAGAATTATAGCCATTTTGAATGGGAATACCAGCATTGGAGAGAAACAGAATTTGATTAGGTACCTTGAGATGTTAAGCAGTAATGCTGATGCGGCTAACATATTGACCAATGGACCAATAATGCTCATACTTGTAAAATTACTTCGCCAATCCAAGGCATCGGCTTTGCGTGTTCAACTTGCTTCACTGGTTGGTCTGTTGATTCGGCACTCCACTTTTGTTGATGACAGTTTGGCTAATTCTGGAATTTTAGGTTCACTGACTGATGGCCTTCGAGACAGGCAGGAAAAAGTGAGGAGGTTCTCAATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCGACTCAAAATGCGGATTGCAGAGATAACAACCCACTTGAATCTCCATTAAAAGACAATAGGACTTCGGTTGGCTGGCAGGTTTCAAATTCATTAATATCTTTTGTGTCATCAATGTTGAGGAAGGGAGAGGATGATTTAACTCAGTTGTATGCATTGAGAACAGTGGAGAATGTTTGCAGCCAGGGCGGGACCTGGGTAGGACGTTTGAGCAGCCAAGATGTTATCAGTAATCTCTGCTATATCTACAGGGCGGCAGGGAAACAAGAGAGCATGCGGCTTACTGCAGGATCATGTTTGGTACGCTTGGTTCGTTTTAATCCTGCTAGCATTCAATCAGTTATGGACAAACTCTCATTCAAGGACCTAGCTTCTGCTCTTGTCAAGGGCAGTCCAAGAGAGCAGCAAATCAGCTTAAATATTCTAAACATGGCTATGCTTGGAAGTCACATGTTCACAAATATTGGAAGACACCTTCTACCCCTCACAGAGGATAAAAATCTGATCCAATGTCTTTTGGCTTTTGTTGAGCAGGGTAGTGAGGTTTTAAAAGGAAAGTCACTTGTCCTTGTGGCTCTCCTCTGTAAGCACGGTAGGAGGTGGCTTTCACACTTCTTTTGTAGCCAAAAGTTGCTTTCTGTGGTGGACAGGCTGGGAAAAGAGAAAGATGTCTATGTACGGCAGTGTTTAGATGCATTTGTGCATGTTGTGACATCTACCATTCCAGGCTTACTGGATACAATAACAGGTGATATCCAGCAAATGATGGGAGGAAGGCGCCAAGGGCATATCTCTGCCCTTGCCAGCAGATCTGCTCCAAAAACCAACATTCATTTGTTTCCCGTTGTCCTTCATCTTCTCGGGAGTTCAATTTTGAAGCACAGAGTAGTTACACCTCAAGTCCTGCGGCAGTTAGCAAATCTAATCAAACTCGTGGAGACACCCTTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGAGTTTTGGAGTGTCTTACAGAGGAATCTCTTGTCGTTCTTGGCAATCCTGACATTTTCATACGTGAAATCCTTCCGAGCTTGACAGTTCTCTATAAGGGTAACAAGGATGGTGATGCCAGATTTTTGTGCCTTAAAACACTTTTTGATGGGATGATTATTGTTTTGAGTGAACCGGTTGAAGAAGAACAGAGATTGGGAGACCTGAAATTCATATCAAATGCCTGTTTTCTTCCTCTCTACCCAACCTTGATTGAAGATGAAGATCCAATTCCTATATATGCACTGAAGCTTCTTGTCATGCTACTAGAGTTTAATTTTATTACAATTCCAGACATTTTACATCTGAAGATAATTTCACAATGCTTTGAGTTCTTGCTTGGTGATCTGTCAAATGCAAATGTGAATAATGTTAAGCTGTGTCTGGCTCTGGCTTCTGCTCCCGAAATGGAGTCCAAGTTACTCTCTCAATTAAAAGTGGTTAGGAGGATTGGCAGTTTTCTTGAGTTTGTATATGCAAAGGGTATGGAGGATTTGCTGGAACCAACTCTAGGGCTATGTAGGGCTTTTCTGGCACGTTCATTCACCTGTGCAAAAGGCTTCAGCTATACAACAGAAACAACTCTCCTAGGTGACCATCCTACTGAGATGAGTGGTGCTGTTGATCCCCAACGGTCCATAAGAAATATAGCGGACTTTGCAAGCAATGCTGGTGTCTTACTGGAGTTGAGTGCCTCCAATGAAACCAATGTTGCAGATATAGCTTCTGAATGTGTAGTTTCACTGCTCAAGGCAGCTCCTAGAGAAGCCACCACTGGTCTACTAACTAATCTCCCCAAGGTCAGTGTAATCCTAGAGTCATGGAGTAGAGGCATTCCTCACTTATTTGTGCAGAGAATGCTTCATGCATTAGATTATGCATGCAAGCAGTACTTATTGCATGCAATGATATTATCAATATCAATACCAGAGATATCAAGAATTAAAATGATTGTTTCTGAACTCAAAAGTTCAAGTGTGCCTGGTTTAGCCACAGCTGCTGCGCTAACAGCCTCGGAATTGCAGCGGCTGCCTCGCTGCATTTGA 4074 0.4205 MNQYHIYEAIGRGKYSTVYKGRKKQTIEYFAIKSVDKSQKSKVLQEVRILHSLDHQNVLKFYSWYETSAHLWLVLEYCVGGDLLSILRQDTQLPEDSVHDLAFDLVKALQFLHSNGIIYCDLKPSNILLDENGHTKLCDFGLARKLRDISKAPSSSLPQAKRGTPSYMAPELFGDGGVHSYASDFWALGCVLYECYAGKPPFVGGEFTQLVKSIISDPTPPLPGNPSQPFVNLINSLLVKDPAERIQWPELCGHAFWRTKLSVMPLPAQPAFDDMIELQAKPCLSVRNGDKPSLDRTPLKYREKDVKGGIDTPTRAITNGHRTQTKGSGKTVEVKQKGPSKISKVVNLLRLSRIAKSNLQKENEKENYRRPLPNSSEIDSEVKIENTDMELDFNESIEDDAPEKTDGSEHATSVPDEKMDNHDQKQGKTDEFENDIHQLGTSPVVNTPVSNDPRSFDHESTPDYPDISAISPSVSPQVKKHRVKEEAGSGLDSDYSRLSNNLSEVLWHPSDLSVRPVMPSRKVDKVSDLIPSLPFQALQAFDFVKLPKEQLEEIQNRIIAILNGNTSIGEKQNLIRYLEMLSSNADAANILTNGPIMLILVKLLRQSKASALRVQLASLVGLLIRHSTFVDDSLANSGILGSLTDGLRDRQEKVRRFSMAALGELLFYISTQNADCRDNNPLESPLKDNRTSVGWQVSNSLISFVSSMLRKGEDDLTQLYALRTVENVCSQGGTWVGRLSSQDVISNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPASIQSVMDKLSFKDLASALVKGSPREQQISLNILNMAMLGSHMFTNIGRHLLPLTEDKNLIQCLLAFVEQGSEVLKGKSLVLVALLCKHGRRWLSHFFCSQKLLSVVDRLGKEKDVYVRQCLDAFVHVVTSTIPGLLDTITGDIQQMMGGRRQGHISALASRSAPKTNIHLFPVVLHLLGSSILKHRVVTPQVLRQLANLIKLVETPFQGRDDFQITLLRVLECLTEESLVVLGNPDIFIREILPSLTVLYKGNKDGDARFLCLKTLFDGMIIVLSEPVEEEQRLGDLKFISNACFLPLYPTLIEDEDPIPIYALKLLVMLLEFNFITIPDILHLKIISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGSFLEFVYAKGMEDLLEPTLGLCRAFLARSFTCAKGFSYTTETTLLGDHPTEMSGAVDPQRSIRNIADFASNAGVLLELSASNETNVADIASECVVSLLKAAPREATTGLLTNLPKVSVILESWSRGIPHLFVQRMLHALDYACKQYLLHAMILSISIPEISRIKMIVSELKSSSVPGLATAAALTASELQRLPRCI* 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0366 1357 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0366 1357 CDD STKc_ULK4 3 257 - -
Lan4g0366 1357 Gene3D - 548 903 IPR011989 -
Lan4g0366 1357 MobiDBLite consensus disorder prediction 316 331 - -
Lan4g0366 1357 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1354 IPR044591 GO:0000911|GO:0000914|GO:0008017
Lan4g0366 1357 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lan4g0366 1357 MobiDBLite consensus disorder prediction 439 455 - -
Lan4g0366 1357 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0366 1357 MobiDBLite consensus disorder prediction 360 479 - -
Lan4g0366 1357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Lan4g0366 1357 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0366 1357 MobiDBLite consensus disorder prediction 398 435 - -
Lan4g0366 1357 Gene3D Transferase(Phosphotransferase) domain 1 1 285 - -
Lan4g0366 1357 MobiDBLite consensus disorder prediction 309 338 - -
Lan4g0366 1357 SUPERFAMILY ARM repeat 536 1128 IPR016024 -
Lan4g0366 1357 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0366 Lan-Chr4 5908452 5915072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0366 1 246 AGC Kinase Gene Family AT1G45160 34.058 2.22e-37 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Lan4g0366 Pkinase 4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0366 K17545 - gmx:100817590 2296.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0366 4 5908452 5915072 Lan16g0450 16 4443568 4449973 LSH