Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0362 ATGGGGTGTGTGTTTGGGAAACAGTCATCGGCGGCGAAGAACACTGCAGCAGAGGAGGCCGTGGTGGAGAGGGAGAGGAGGAGGGAGGAATTGAAAGAAGCAAAAGGTGAAGTTGTTGAGGGTGAGAGTGAGGCCCAGAATGGTGGTAGGAATCAGAAGGAGGGTGTTGTTGGAGAAGAGAAGAGGACAATGCCTTCAAGGAGGCGATCTTCGAAGTTTAATCCGCGTCTGAGCAATCCAACTGGTCATGTTCAAGGTGAGCAGGTGGCAGCAGGGTGGCCCTCTTGGCTCTCCAAGGTTGCTGGGGAAGCTATCAATGGAATGATCCCTAGGAGGGCTGACACTTTCGAAAAAATTGATAAGATTGGGCAAGGTACATACAGCAATGTTTATAAAGCAAGGGATACTTTAACAGGGAAAATTGTTGCCCTAAAGAAGGTCCGTTTCGACAATTTAGAGCCCGAGAGTGTGAAATTCATGGCCAGGGAGATTCTGATTCTACGTCGTCTAGATCATCCAAATGTTGTCAAACTGGAAGGCTTGGTGACATCTAGAATGTCATGCAGTTTGTATCTTGTGTTTGAATACATGGTGCATGATTTGGCTGGACTTGCTACAAACCCAGCTATTAAGTTCACAGAGTCTCAGGTTAAATGCTACATGCATCAGCTATTTTCTGGACTGGAACATTGTCACAACCGCCATGTGCTGCATCGTGATATAAAAGGATCAAACCTCCTTATTGACAATGAAGGAATTCTTAAGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTAATCGCAGGCACCCTATGACCAGTAGAGTGGTGACTTTATGGTATCGACCTCCGGAACTTCTTCTTGGGGCCACTGAATATGGTGTAGGAGTGGATCTCTGGAGTGCTGGCTGCATTCTTGCAGAATTATTGGCTGGAAAGCCTATTATGCCCGGTCGAACGGAGGTGGAGCAGCTACATAAGATATTTAAACTATGTGGTTCTCCTTCTGACGAATATTGGAAAAAGTCAAAGTTGCCACATGCTACAATTTTTAAGCCCCAGCAGTCCTACAAGCGGTGCATAGCAGAAACATTTAAAGATTTTCCACCGTCATCTCTGCCACTAATTGAGATCCTTCTTGCAGTTGATCCAGCTGAACGCCAGACTGCCACTGCTGCATTGCATAGTGAATTCTTTACAACAAAACCTTATGCGTGTGAACCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCAGCCGGTAAAGCTAATGCTGATGCTGTCAAGAAATCTCGTCCACGTGACCGAGTTGGAAGAGGAATTCCTGTTCCAGAGGCCAATGCTGAACTGCAAGTGAATATTGATAGACGGCGAATGATAACGCATGCTAATGCTAAGAGCAAGAGTGAGAAATTTCCTCCTCCCCACCAAGATGGAACTCTAGGCTATTCTTTGGGTTCTTCACATCACATGGATCCAGGTTTTGATGCTCCTGATGTCCCATTTAGTTCCACAAACTTGTCACAACCGAAAGCAAATATCCAAACCTGGTCCGGCCCATTGGTAGAACCTGCTCCTGTGGGTGCACCTAGGAGAAAGAAGAAACTTGGAAGGTGA 1665 0.4607 MGCVFGKQSSAAKNTAAEEAVVERERRREELKEAKGEVVEGESEAQNGGRNQKEGVVGEEKRTMPSRRRSSKFNPRLSNPTGHVQGEQVAAGWPSWLSKVAGEAINGMIPRRADTFEKIDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTESQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNRRHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIEILLAVDPAERQTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADAVKKSRPRDRVGRGIPVPEANAELQVNIDRRRMITHANAKSKSEKFPPPHQDGTLGYSLGSSHHMDPGFDAPDVPFSSTNLSQPKANIQTWSGPLVEPAPVGAPRRKKKLGR* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0362 554 Gene3D Transferase(Phosphotransferase) domain 1 199 439 - -
Lan4g0362 554 Gene3D Phosphorylase Kinase; domain 1 104 198 - -
Lan4g0362 554 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0362 554 MobiDBLite consensus disorder prediction 435 457 - -
Lan4g0362 554 MobiDBLite consensus disorder prediction 1 85 - -
Lan4g0362 554 Coils Coil 14 44 - -
Lan4g0362 554 MobiDBLite consensus disorder prediction 517 532 - -
Lan4g0362 554 MobiDBLite consensus disorder prediction 70 85 - -
Lan4g0362 554 MobiDBLite consensus disorder prediction 435 455 - -
Lan4g0362 554 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0362 554 PANTHER CELL DIVISION PROTEIN KINASE 63 553 - -
Lan4g0362 554 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0362 554 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Lan4g0362 554 PANTHER CYCLIN-DEPENDENT KINASE 63 553 - -
Lan4g0362 554 MobiDBLite consensus disorder prediction 480 554 - -
Lan4g0362 554 CDD STKc_CDK9_like 116 400 - -
Lan4g0362 554 MobiDBLite consensus disorder prediction 18 40 - -
Lan4g0362 554 SUPERFAMILY Protein kinase-like (PK-like) 110 405 IPR011009 -
Lan4g0362 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0362 Lan-Chr4 5877220 5883922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0362 111 438 Core Cell Cycle Gene Families AT5G10270 51.163 1.22e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan4g0362 Pkinase 9.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0362 K08819 - gmx:100779413 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0362 4 5877220 5883922 Lan19g0642 19 12129501 12135772 LSH
Lan4g0362 4 5877220 5883922 Lan16g0455 16 4486363 4491527 LSH