LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan4g0358	ATGGGTGGTTGTTTTCCTTGTTTTGGATCATCCAAGAATGAGGATAACAATAATGGGGTGAAAGAAGTAGTTGCCAAAAAGGAATCTTTCAAAGATGCTTCAATTCCTCAATCTCAATACCCCACTAGGGTTAGCTCAGATAAATCGAAATCACGAAGTGGCTCAGATCCTAAGAAGGAAATACCAGTTGTAAAGGATGGACCAACAGCCCATATTGCTGCACAAACATTTACATTCCGTGAGCTTGCAGTTGCTACCAAGAATTTTAGGCCAGAGTGTTTATTAGGTGAAGGAGGTTTTGGACGTGTTTACAAAGGCCGCCTTGAGAGCACAGGACAAGTAGTTGCTGTAAAACAGCTTGACCGAAATGGCCTTCAAGGAAATCGAGAATTTTTGGTGGAGGTTCTCATGCTCAGCCTCTTACATCACCCAAATCTTGTGAATTTAATTGGTTATTGTGCTGATGGTGACCAGCGGCTTCTTGTTTATGAATTTATGCCATTGGGGTCTTTGGAGGATCATTTACATGATCTTCCACCTGACAAGGAGCCCCTGGACTGGAACACTAGGATGAAAATAGCGGCCGGTGCAGCAAAGGGATTGGAATATTTGCACGACAAGGCAAACCCCCCTGTGATATATAGAGACTTGAAATCATCGAACATCCTCCTAGATGAGGGTTATCATCCAAAGTTATCTGATTTTGGGCTGGCAAAGCTTGGTCCAGTTGGTGACAAGACTCATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCCCCAGAGTATGCTATGACCGGTCAATTAACTCTGAAGTCTGATGTCTACAGTTTCGGAGTTGTCTTCCTTGAACTTATTACCGGGCGCAAGGCTATTGATAATACACGTTCACATGGAGAGCATAATCTTGTTGCATGGGCACGACCTCTCTTTAAAGATCGTAGGAAGTTCCCCAAAATGGCTGACCCTCTACTTCAAGGCCATTATCCAATGCGAGGACTGTACCAAGCACTTGCAGTTGCAGCAATGTGTTTGCAGGAGCAAGCTGCTACAAGGCCTCTTATCGGTGATGTAGTAACTGCTCTCACATATCTGGCCTCCCAGACATATGATCCAAATGCACCCAATCTGTCTAATAGGCTTGGTGGTCCGTCAACCCCTAGGAGCAAGGATGACAGAAGGAACATGGGAGACGGTGTGGATAGCCCAGACCATGGACGGCTTGGCTCGCCTTCCACCCACAGAAACTCACCTGATTACAGGAAGAGAGACGGTAGGGATCCGAGTTCTGGGACAGAGTTAGGCAGGAGTGTCTCTAATGGTGGATCAGGGAGAAAATGGGGATTGGACGATGTAGAAAGGCAGGAGTCTCAGAGAGATAGCCCTGTAAATACTGGAAGAGCTAGAGAGACTCCAAGGAACCGTGACCTGGACAGAGAACGCGCGGTGGCAGAAGCAAGGGTATGGGGTGAAAATTGGAGAGAAAAGAAGAGAGCAAATGCCATGGGCAGCTTTGATGCTACCAATTAG	1533	0.4625	MGGCFPCFGSSKNEDNNNGVKEVVAKKESFKDASIPQSQYPTRVSSDKSKSRSGSDPKKEIPVVKDGPTAHIAAQTFTFRELAVATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRSHGEHNLVAWARPLFKDRRKFPKMADPLLQGHYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAPNLSNRLGGPSTPRSKDDRRNMGDGVDSPDHGRLGSPSTHRNSPDYRKRDGRDPSSGTELGRSVSNGGSGRKWGLDDVERQESQRDSPVNTGRARETPRNRDLDRERAVAEARVWGENWREKKRANAMGSFDATN*	511

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan4g0358	510	PANTHER	SERINE/THREONINE-PROTEIN KINASE PBL27	1	505	-	-
	Lan4g0358	510	SMART	serkin_6	89	366	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan4g0358	510	CDD	STKc_IRAK	95	364	-	-
	Lan4g0358	510	MobiDBLite	consensus disorder prediction	370	386	-	-
	Lan4g0358	510	MobiDBLite	consensus disorder prediction	49	63	-	-
	Lan4g0358	510	MobiDBLite	consensus disorder prediction	387	402	-	-
	Lan4g0358	510	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	212	224	IPR008271	GO:0004672\|GO:0006468
	Lan4g0358	510	MobiDBLite	consensus disorder prediction	417	431	-	-
	Lan4g0358	510	ProSitePatterns	Protein kinases ATP-binding region signature.	95	118	IPR017441	GO:0005524
	Lan4g0358	510	Pfam	Protein kinase domain	94	304	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan4g0358	510	MobiDBLite	consensus disorder prediction	370	482	-	-
	Lan4g0358	510	ProSiteProfiles	Protein kinase domain profile.	89	366	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan4g0358	510	PANTHER	OS07G0668900 PROTEIN	1	505	-	-
	Lan4g0358	510	SUPERFAMILY	Protein kinase-like (PK-like)	71	363	IPR011009	-
	Lan4g0358	510	MobiDBLite	consensus disorder prediction	32	48	-	-
	Lan4g0358	510	Gene3D	Phosphorylase Kinase; domain 1	61	165	-	-
	Lan4g0358	510	MobiDBLite	consensus disorder prediction	31	63	-	-
	Lan4g0358	510	Gene3D	Transferase(Phosphotransferase) domain 1	166	378	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan4g0358	Lan-Chr4	5849587	5867507	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan4g0358	69	408	Glycoside Hydrolase	AT3G07070	69.118	1.69e-169	483

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-1	Lan4g0358		Pkinase	4.3e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan4g0358	-		-	gmx:100814575	931.398