Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0346 ATGAGGAGAAATTGCAACTTAGAACTTGCTCTTTTTCCTTCTCATGCTTCTGATCATCACTACAACAACCACTCTATGATGGAAGAAGCTTGTGGGAGCCTAAAGCTCCAACACCTCCACCATCAACAACAACAACAACGCCAGCAGGAACAACACAACACTCTTACTATTTTCTATGAAGGAAAGATTTGTGTTTCTGATGTCACGGAATTTCAGGCCAAATCCATTATATTGCTTGCAAATAAAAAAATGGAGGAAAGATTGAAAACACCAAATGGGTCAGAGCCATCTACGCCAACAGTAGTTGAATCTCATCAACCATTGTATAGTCCTGCCACACCCCTTTCAATGAAAAGATCACTGCAACGGTTCCTCCAGAAGAGAAAGAATAGGAAACAAGAAGCATCTCCATACAATCACTAG 423 0.4066 MRRNCNLELALFPSHASDHHYNNHSMMEEACGSLKLQHLHHQQQQQRQQEQHNTLTIFYEGKICVSDVTEFQAKSIILLANKKMEERLKTPNGSEPSTPTVVESHQPLYSPATPLSMKRSLQRFLQKRKNRKQEASPYNH* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0346 140 ProSiteProfiles Tify domain profile. 48 82 IPR010399 -
Lan4g0346 140 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 140 IPR040390 -
Lan4g0346 140 MobiDBLite consensus disorder prediction 91 120 - -
Lan4g0346 140 SMART tify_2 48 82 IPR010399 -
Lan4g0346 140 Pfam Jas motif 118 138 IPR018467 -
Lan4g0346 140 MobiDBLite consensus disorder prediction 88 140 - -
Lan4g0346 140 PANTHER - 1 140 - -
Lan4g0346 140 Pfam tify domain 50 81 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0346 Lan-Chr4 5628179 5630158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0346 1 138 Tify Gene Family AT1G30135 38.129 2.72e-22 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan4g0346 tify 3.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0346 - - gmx:100500349 166.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0346 4 5628179 5630158 Lan16g0488 16 5024902 5027741 LSH