Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0340 ATGTTAGAAACTGGTTACGCCCGTGATTCTGAGCTCAGCTTAGACACTCTTAATTCCTCAACACAACGTTCTTCAATGAGCAGTGAAAGCATTTGCAGCACCAGTTTCAGCCGTCTCTCCTTCGAGAATCTTCCTACTTCGCCGGAATCCAACCTTTCCATCAAGCCTCATCGCTCCTCTGATTTCGCCTACTCCGCCATCCGCCGCAAGTCTGGCCTCACCTTCCGTGACTTCCACCTCCTCCGCCGAATCGGCGCCGGAGATATCGGAACAGTCTATCTCTGCCGCCTCAGAACTACCGATGACGAGTTCGATAGCGTTGTAGACGGCGGTGACTCTGGATGTTTCTACGCTATGAAGGTGGTGGACAAAGAAGCGGTGGTTTTGAAGAAAAAAGAGCAGAGAGCTGAGATGGAGAGAAAAATTCTGAAGATGCTAGATCATCCTTTTCTTCCTACGCTTTATGCTGAGTTTGAAGCTTCGCATTTCTCTTGCATTGTTATGGAGTTTTGTTCTGGCGGTGATTTACACTCGCTCCGTCACAAGCACCCTCATAAACGCTTCCCTATCAACTCCGCAAGGTTTTACGCAGCTGAGGTACTAGTGGCATTAGAGTACCTTCACATGTTGGGAATCATTTATAGAGATCTAAAGCCGGAAAACGTGTTAGTCAGATCAGACGGTCACATCATGCTCTCTGATTTTGATCTCTCGCTCTGTTCTGATGCAATCCCAGCCGTTGAATCACATGATGATAATCCAGCATTCTTACCATACAACCGTTCTAATATCACTCCTTTCTCATGTCTATCAAACCGATTATTCCGGTCCAGGAAGGTTCAAACGGTTCAACCAAACCGGTTATTCGTGGCTGAACCGGTTGGTGCAAGGTCTTGTTCTTTTGTTGGGACTCATGAATACGTGTCACCGGAAGTTGCTTCTGGTAACTCACACGGTAACGCCGTTGACTGGTGGTCGTTTGGGATATTCATTTATGAGCTTATGTACGGTCGTACTCCGTTTGCGGGACCATCGAATGAGGCTACACTGCGCAACATCATAAACAAACCTGTCACCTTCCCTACTTCTATATCTTCCACCTCGCTTGAGGTTCACGCGCGGGACCTCGTGTCAGGGTTGCTGAAAAAAGACCCGAACCGGAGGCTCGGGTCGAAGCGTGGTGCTGCTGAGGTTAAGAAGCATCCTTTCTTTCAAGGGCTTAATCTTGCGCTGATTAGGATGCTGACTCCGCCGGAGGTGCCGTGCCTGAGAAGGAATAAAACGACGCCGTTAGTCCCGGTACAGGGAAATGGTAGTGGTAGTAGTCGGAGGCTGCAGCCAACGACGTCGTTCGATTACTTTTGA 1365 0.4879 MLETGYARDSELSLDTLNSSTQRSSMSSESICSTSFSRLSFENLPTSPESNLSIKPHRSSDFAYSAIRRKSGLTFRDFHLLRRIGAGDIGTVYLCRLRTTDDEFDSVVDGGDSGCFYAMKVVDKEAVVLKKKEQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKHPHKRFPINSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESHDDNPAFLPYNRSNITPFSCLSNRLFRSRKVQTVQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYELMYGRTPFAGPSNEATLRNIINKPVTFPTSISSTSLEVHARDLVSGLLKKDPNRRLGSKRGAAEVKKHPFFQGLNLALIRMLTPPEVPCLRRNKTTPLVPVQGNGSGSSRRLQPTTSFDYF* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0340 454 ProSiteProfiles Protein kinase domain profile. 78 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0340 454 PANTHER FLIPPASE KINASE 1-RELATED 1 454 - -
Lan4g0340 454 SUPERFAMILY Protein kinase-like (PK-like) 57 426 IPR011009 -
Lan4g0340 454 MobiDBLite consensus disorder prediction 429 454 - -
Lan4g0340 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lan4g0340 454 MobiDBLite consensus disorder prediction 430 454 - -
Lan4g0340 454 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 454 - -
Lan4g0340 454 CDD STKc_phototropin_like 76 421 - -
Lan4g0340 454 Gene3D Transferase(Phosphotransferase) domain 1 297 422 - -
Lan4g0340 454 Gene3D Transferase(Phosphotransferase) domain 1 171 238 - -
Lan4g0340 454 Pfam Protein kinase domain 299 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0340 454 Pfam Protein kinase domain 78 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0340 454 SMART serkin_6 78 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0340 454 Gene3D Phosphorylase Kinase; domain 1 76 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0340 Lan-Chr4 5537353 5539251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0340 9 454 AGC Kinase Gene Family AT2G34650 64.381 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan4g0340 Pkinase 2.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0340 - - gmx:100795536 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0340 4 5537353 5539251 Lan16g0498 16 5157667 5159553 LSH