Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0335 ATGAGACTTTCTTCAGCTAGTTTTAGTCCTCCACCCCAGGAAGGGGAAAAGAGATGTCTAGATTCAGAACTTTGGCATGCATGTGCTGGACCTCTTGTTTCATTACCAGCACTTGGAAGCCGTGTGGTTTACTTTCCACAAGGTCACAGTGAGCAAGTGGCTGTGTCAACCAACAAGGAAGTGGATGCTCATATCCCCAACTATCCGAGCTTACCACCGCAACTCATTTGTCAGCTTCATAATCTGACTATGCATGCTGATGCTGAGACCGATGAAGTGTATGCGCAAATGACCTTGCAACCTCTGAATCCTCAAGAGCAAAAGGAGGCATACATTCCAGCAGAGTTGGGCACTCCAAGTAAACAGCCGACAAACTACTTTTGCAAAACTTTGACTGCCAGTGACACAAGTACTCATGGGGGATTCTCTGTTCCTCGCCGGGCAGCTGAAAAAGTGTTTCCTCCACTGGACTTTTCCCAGCAACCTCCATGCCAAGAGTTAATTGCAAGGGATTTGCATGGTAATGAATGGAAATTCAGGCATATCTTCCGAGGCCAGCCCAAAAGGCATCTTCTTACAACAGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGACGCTGTGCTATTTATCTGGAATGAAAAGAACCAATTGCTTCTTGGTATCCGGCGGGCTAATCGACCACAAACTGTGATGCCTTCTTCAGTTTTGTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCAGCAGCTCATGCAGCTGCAACAAATAGCCGTTTCACCATTTTCTATAACCCACGTGCCAGCCCATCAGAATTTGTCATACCCTTAGCAAAGTATGTTAAAGCTGTGTATCATACTCGAGTGTCAGTTGGTATGCGCTTCAGGATGTTGTTTGAAACAGAGGAGTCAAGTGTGCGGCGATACATGGGTACAATAACTGGCATTAGTGACTTGGATCCTGTCCGGTGGCCGAATTCACATTGGCGTTCAGTCAAGGTTGGATGGGATGAATCCACTGCAGGAGAGAGGCAACCTAGAGTGTCTCTATGGGAAATTGAGCCACTGACAACCTTTCCCATGTATCCATCGCCATTCCCCCTTAGGATTAAACGGCCGTGGCCTCCAGGATTGCCTTCATTCCATGGCATGAAGGATGAAGATTTCGGCATAAATTCTCCAATGTTGTGGCTTCCAGACCCTGATAGAGGGCTTCAGTCTATTAATTTTCAAGGGATGGGAGTTAATCCTTGGATGCAGCAAAGGTTTGATCCGTCCATGCTGAATATGCAAACAGATATGTATCAAGCTGTGGCTGCTGCTGCACTCCAAGATATGAGGACTATAGATCCTTCGAAACAACATCCTGCTCCCTTAGTTCAATTTCAGCAACCACAGAACTTCCCGAACAGGACTGTGGCTTTGATGCAGGCCCAGATGTTGCAGCAGTCACAGTCACAGCAGCAGGCTTTTCAAAACAATCAAGAGAATCGGCAGTCATCTCAATCTCAGACACAAACTCAGATGCATCTTCAGCAGCAGCTACAGCATCAGCACTCATTCAAAAGTCAGCATGGGCATCATCACAACAAGCAACAGCAACAACCACAACAACAACAGCAGCAGCAGTTACCACAGCAAATGGTAGATAATCAGCAGATTTCCAATGCCGTCTCTACAATGTCACAATTTGTTTCGGCACCTCAATCTCAATCTCAATCACCACCTATGCTAGCTCTCGTTCCAGTGTCCCAACAACAAACATTTTCTGATTCCAGTGGGAATTCTACCGCTATTGTTTCTCCCCTGCACAGTATCTCGGGTTCATTTCCCCAGGATGAATATTCCCACATTCTGAACCTTCCTACAACAAACTCTTGGGTTCCTGTTCAGACTTCAACTGCATGGCCACCCACCAAACGTGTTGCAGTGGATCCTCTCCTTTCTTCTGGAATATCTCAATGTGTTCTGCCGCAGGTAGATCGGGTAGGGCAGCCACTTAGTACCATGTCACAAAATGGTATTACATTGCCCCCATTTCCTGGTAGGGAGTGCTCACTAGACCAAGAAGGGAGCAATGATCCACAAAACCATCTTTTATTTGGTTTTAATATAGAGCCCTCATCACTTCTAGTGCAAAATGGAATGACAAGCCTTAAGGGAGTCGGCAACAACAGTGACTCCTCAACCATGCCATTTCAATCTTCTAATTTCCTCAATAACACTGGCACTGATTCTTCATTGATTCCTGGAATGATACATAGCATTGGTGATTCGGGCTTCCTGCAGACCAAAGAAAATTTGGGGCAGGGAAACTCATCAAACAAGACCTTTGTGAAGGTTTATAAGTCAGGGTTCCTCGGAAGATCATTAGATATCACTAAATTCAGCAGCTACCACGAGCTACGCAGTGAGCTTGCTCGTATGTTTGGCCTTGAAGGCGAGCTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGACGTCCTTCTCCTAGGCGATGGCCCTTGGCCGGAATTCGTAAATAGTGTATGGTGTATCAAGATACTTTCACCCCAGGAGGTGCAGCAGATGGGCAACACCGGCCTTGAGCTTCTGAACTCGGTTCCAATTCAAAGGCTCTCTAATGGCATCTATGATGACTACATGAGCCGTCAGGACCCGGGAAGTTTAAGCACTGGAATAACAAGTGTGGGATCTTTAGAATACTAG 2739 0.4644 MRLSSASFSPPPQEGEKRCLDSELWHACAGPLVSLPALGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNLTMHADAETDEVYAQMTLQPLNPQEQKEAYIPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRIKRPWPPGLPSFHGMKDEDFGINSPMLWLPDPDRGLQSINFQGMGVNPWMQQRFDPSMLNMQTDMYQAVAAAALQDMRTIDPSKQHPAPLVQFQQPQNFPNRTVALMQAQMLQQSQSQQQAFQNNQENRQSSQSQTQTQMHLQQQLQHQHSFKSQHGHHHNKQQQQPQQQQQQQLPQQMVDNQQISNAVSTMSQFVSAPQSQSQSPPMLALVPVSQQQTFSDSSGNSTAIVSPLHSISGSFPQDEYSHILNLPTTNSWVPVQTSTAWPPTKRVAVDPLLSSGISQCVLPQVDRVGQPLSTMSQNGITLPPFPGRECSLDQEGSNDPQNHLLFGFNIEPSSLLVQNGMTSLKGVGNNSDSSTMPFQSSNFLNNTGTDSSLIPGMIHSIGDSGFLQTKENLGQGNSSNKTFVKVYKSGFLGRSLDITKFSSYHELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNTGLELLNSVPIQRLSNGIYDDYMSRQDPGSLSTGITSVGSLEY* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0335 912 SMART B3_2 127 229 IPR003340 GO:0003677
Lan4g0335 912 MobiDBLite consensus disorder prediction 533 551 - -
Lan4g0335 912 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Lan4g0335 912 MobiDBLite consensus disorder prediction 488 523 - -
Lan4g0335 912 Gene3D - 291 363 - -
Lan4g0335 912 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 892 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan4g0335 912 Gene3D - 125 228 IPR015300 -
Lan4g0335 912 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Lan4g0335 912 SUPERFAMILY CAD & PB1 domains 773 854 - -
Lan4g0335 912 ProSiteProfiles PB1 domain profile. 779 863 IPR000270 GO:0005515
Lan4g0335 912 Pfam AUX/IAA family 772 864 IPR033389 -
Lan4g0335 912 Gene3D - 774 868 - -
Lan4g0335 912 MobiDBLite consensus disorder prediction 488 551 - -
Lan4g0335 912 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Lan4g0335 912 CDD B3_DNA 126 227 IPR003340 GO:0003677
Lan4g0335 912 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan4g0335 912 PANTHER AUXIN RESPONSE FACTOR 1 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0335 Lan-Chr4 5478192 5484421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0335 1 483 B3 DNA Binding Superfamily AT1G30330 85.041 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan4g0335 AUX_IAA 2.1e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0335 - - gmx:100798719 1470.68