Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0333 ATGGAGATGGTGAGAGAGAGAAAAGAGAGGCCACTAAAAATGTCATGGTGGTTTAGTTCAAGTTATCTACTTTCTCTTCTTTTGCTATTACAGTTTTCTTATCAACTTGCAAATTGTGCCTCTATAGTAAAGTTCCTTCCTGGGTTCCAGGGATCCCTTCCTTTTCTCCTAGAAACTGGATATGTAGGAGTAGGTGAAAGAGAGGAAGTGCAGGCCTTTTACTACTTTATTCAGTCAGAAAATAATCCAAAGGAAGATCCTATCTTACTTTGGCTCACAGGTGGTCCTGGTTGCTCTGCTTTGTCTGGTCTTGTTTTTGAAATAGGTCCATTTACAGTTAAAAATGAGGAATATAATGGGAGCTTGCCTACTTTGGTCTTGAGGCCACATTCATGGACAAGTGTAAGTAGCATTGTATTTGTAGATTTGCCTGTTAATACAGGCTTCACATATGCTACAACGGAATCTGCAGCGAAGCGAAGCGACCGAAAACTAGTTCATCAAACTCATCAATTTCTTAGAAAGTGGCTTAATGAGCATCCAGAATTTCTCTCAAATGAAGTTTACATTGGTGGTGATTCATATTCTGGTATTCCTGTTCCAGCTATTGTTGAAGAAATTTCACAAGGAAACGAAGAAGGGGTCCAACCATGGATAAATCTACAGGGATACTTGCTGGGAAATGCGATAACAGATTCAATCGAAAATAACTACAAAGTCGCCTTTGCTCACGGAATGGGACTTATTTCTGATGAACTCTACAAGTCACTGCAAAAGAATTGTAGAGGAGATTACATACACGAAACTACGAGAAATGAGTTATGTTCTAGAGACCTCCAGTCATATGATGAGCTTACTTCAGGAATTAATCCTGTCCATATTTTGGAACCGAAATGTGAGCTTGCTTCTCCTAAGCCATTTGAAGTTTCTTGGAGGAGGTCTCTAAATGAGAAACACCCTCCGAATATTACCGATACACATCTCACATTGCCGGCCTTAAACTGTCGGGCATATGCATACACCCTCTGCAGTCATTGGGCCAATGATGTTAATGTTCGAAATGCACTGAATGTCCGAAAGGGAACTATAGGGAAATGGCAACGATGTACCTTTGATATACCAAACGAGCACGATATCCCTACTAGCTTTCCATATCATGTAATTCTCAGTAGAAAAAGCTACCGTGCACTGATATACAGTGGCGATCATGACATGAAGGTTAATTTCGTCGGGACTCAAGCGTGGATAAGATCTTTAAACTACTCCATTGTGGATGATTGGAGGCCATGGTATACAAATGGTCAAGTTGCAGGATACACAAGAACTTACTCCAATCAGATGACATTTGCAACTGTTAAGGGTGGAGGCCATACAGCTCCAGAGTACAAGCCTGAAGAATGTTTGGCTATGTACAGTAGGTGGATATCTAAGAGGCCTTTGTAG 1443 0.4082 MEMVRERKERPLKMSWWFSSSYLLSLLLLLQFSYQLANCASIVKFLPGFQGSLPFLLETGYVGVGEREEVQAFYYFIQSENNPKEDPILLWLTGGPGCSALSGLVFEIGPFTVKNEEYNGSLPTLVLRPHSWTSVSSIVFVDLPVNTGFTYATTESAAKRSDRKLVHQTHQFLRKWLNEHPEFLSNEVYIGGDSYSGIPVPAIVEEISQGNEEGVQPWINLQGYLLGNAITDSIENNYKVAFAHGMGLISDELYKSLQKNCRGDYIHETTRNELCSRDLQSYDELTSGINPVHILEPKCELASPKPFEVSWRRSLNEKHPPNITDTHLTLPALNCRAYAYTLCSHWANDVNVRNALNVRKGTIGKWQRCTFDIPNEHDIPTSFPYHVILSRKSYRALIYSGDHDMKVNFVGTQAWIRSLNYSIVDDWRPWYTNGQVAGYTRTYSNQMTFATVKGGGHTAPEYKPEECLAMYSRWISKRPL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0333 480 Gene3D - 334 480 - -
Lan4g0333 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 479 IPR001563 GO:0004185|GO:0006508
Lan4g0333 480 Pfam Serine carboxypeptidase 47 476 IPR001563 GO:0004185|GO:0006508
Lan4g0333 480 Gene3D alpha/beta hydrolase 37 307 IPR029058 -
Lan4g0333 480 SUPERFAMILY alpha/beta-Hydrolases 43 479 IPR029058 -
Lan4g0333 480 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 20 479 - -
Lan4g0333 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Lan4g0333 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Lan4g0333 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Lan4g0333 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0333 Lan-Chr4 5457330 5461215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0333 37 66 Calmodulin-binding Proteins AT2G22960 66.667 5.65e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0333 K16296 - gmx:100792006 717.613