Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0331 ATGGCAGAAGATGAAGGACACAAAGCCAACAAAGTCAATGAAAAAGTTCATTTCTATAAGCTGTTCACTTTTGCTGATAGCCTTGATTCGACTTTGATGACCATTGGTGTCATAAGTGCCATAGGAAATGGGTTATCACAACCTCTCATGACCCTCATTTTTGGGAAACTTATCAATGCCTTTGGTACCACAGATCAATCCAACATTGTTAAGGAAGTCTCTAAGGTTTTATTGTTCTTTGTGTATCTGGCTGTTTGGGCTGGAATTGCCTCATTCCTACAGGTATCATGTTGGATGGTAACAGGAGAAAGACAAGCTGCAAGGATTCGAAGCTTGTACTTGAAAACTATATTGAAACAAGACATTGCATTCTTTGATACTGAAACTAACACTGGTGAGGTTATTGGGAGAATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGAAAGTTCTTACAACTACTTTCATCCTTTATCGGTGGCTTCATGATTGCTTTTACAAAAGGATGGCAACTCACCATAGTTTTGCTTGCATGTATTCCTTGTCTTGTCATTGTTGGTGGAATCATGTCAATGATGATGGCCAAAATGTCAAGCCGTGGCCAAACTGCTTATGCTGAAGCTGGAAATGTTGTTGAACAAACACTTGGAGCCATTAGAACAGTTGCATCTTTTACTGGTGAGAAAAAAGCAATAGATAAGTATCATAACAAGCTAAAAGTTGCATATGCTACAACAGTTCAACAAGGGCTAGCATCAGGGTTAGGAATGGGACTTCTTTTGTTGATTGTCTTCAGCACTTATTCACTTGCTATGTGGTATGGTTCCAAACTGATAATTGAGAAAGGATACAATGGTGGAGATGTCTTCAATATAATTGTATCTGTTAATAGTGGTGGAATGGCACTTGGTCAGACAACCCCATGCCTTAATGCATTTGCAGCAGGGCAAGCAGCAGCATATAAGATGTTTGAGACGATTAAACGAAAACCGACAATTGATGCTTATGACACAAATGGTGTTGTCTTGGAAGACATAAAGGGAGATATTGAACTCAAAGATGTTCACTTCAGATACCCTGCAAGGCCAGATATTCAGATATTTTCCGGATTCTCGTTCTACATACCAAGTGGCACAACTGCTGCTTTAGTTGGGCAAAGTGGGAGTGGGAAGTCCACTATAATCAGTTTACTAGAAAGATTCTATGATCCTGATTCTGGAGAAGTACTTATAGATGGTGTGAATCTTAAGAGTTTTCAAGTTAGATGGATAAGAGAACAAATTGGGCTTGTTGGTCAAGAACCGGTCTTGTTTGCAGCCAGTATCAAAGAGAACATAGCATATGGCAAAGAAGGCGCAACTGATGAGGAGATAACAACAGCAATAACCCTTGCCAATGCCAAAAAGTTCATTGACAAGTTACCTCAGGGCATTGATACGATGGTAGGAGGTAATGGCACTTCCCTTTCAGGTGGGCAAAAGCAAAGAATCGCTATTGCGAGAGCAATTTTAAAGAACCCCAGAATCCTTCTTCTTGATGAAGCAACTAGTGCATTAGATGCTGAGTCTGAAAGAATAGTTCAAGAAGCCTTAGAACAAGTCATGTCAAACAGGACAACCGTAGTCGTTGCACATCGTTTGACAACTATTAGAAATGCTAACACCATAGCAGTTGTTCATCAAGGGAAAATTGTGGAAAAAGGAACTCACGACGAGTTAATCAAGGATGTTGATGGTGCTTATTCTCAGCTTATTCGTCTACAAGAAGGAGCTAAGGACAACGAAAGACAACATAAGTATGAAGTGGATAAGACAAACAACAGTTTTAATTTAGATAGTAACACTCACATGTCTAGATCATCCCCCCAGAGGACATCCTTTGTGAGATCAATAAGCCAAAGTTCATCAGGGAGAAGACAATCTCTCTCACTTAGCTTTGGTCTTCCTTACCCAATCGGCGCGCTTGAATCTACAGAAGGGGATAATAAGGACCTTGAAAGTAATGAACTTGGTAATAAGAAGAGCCAAAATGTCTCTATCAAACGATTGGCTCAGTTGAACAAGCCTGAGATTCCTGTCCTATTACTAGGATCCATTGCTGCTGCAGTGCATGGTGTTGTTTTACCTATATTTGGTCTCTTGCTTTCATCAGCTATTAATACTTTCTATAAACCTCCAGAACAACTTCGAAAAGATTCTGTGTTTTGGTCAGTCCTATTTGTTAGTTTGGGGATTATTACTCTTGTGGCCTTATCCGTGCAAAACTACTTATTTGGAATTGCTGGTGGAAAACTTATAGAACGAATTCGATCGTTAACATTTCAAAAGGTTGTGCATCAAGAAATCAGTTGGTTTGATCATCCTTCGCATTCAAGCGGTGCAGTGAGTGCAAGGTTAGCTACGGATGCTTCAACAGTAAGAAGTCTTGTTGGTGACACTCTTGCTCTCATTGTTCAAAATATAGCAACAATCACAGCTGGTTTAGTTATAGCATTCTCAGCTAATTGGATACTCGCTTTGGTGATCCTGGCCGTTTCACCCTTGTTGCTTATACAAGGATACATTCAGACCAAGTTTTTAAAAGGATTCAGTGCTGATGCAAAGGTGAAGTATGAAGAGGCAAGTCAAGTGGCAAATGATGCCGTTGGTAGCATTAGAACCATTGCATCATTCTGTGCTGAACCGAAAGTGATGGATATGTACGATGCGAAATGTTCAGGGCCAGCAAAACAAGGTGTTCGGTTGGGGCTTGTCAGTGGTGTAGGACTTGGTGTCTCTTTTTTTGTTTTATATTGCACAAATGCTCTATGTTTCTATGTAGGATCTATACTTGTGCAACATGGAAAAGCAACTTTTGGAGAGGTTTTCAAGGTTTTCTTTGCTTTAACAGTTACCGCAATCGGTGTTTCCCAGTCTAGTGCCCTGGCACCAGATACAAACAAGGCCAAAGACTCTGCAGCTTCAATATTTGAAATTCTTGACACAAAACCAGCCATTGACTCAAGCAGCAATGATGGCATGACACTAGAAATTGTAAAAGGTGATATTGAACTTGAACACGTTAGCTTTAAGTATCCAACAAGGCCTGATATTCAAATATTCAAAGATTTGTGTCTAAGCATCCCAGCTGGAAAGACTGTTGCATTGGTTGGAGAAAGTGGGAGTGGAAAATCAACAGTTATAAGCCTGTTAGAGAGATTCTATAACCCGGATTCGGGACGGGTACTAATAGACGGAGTGGATATAAAAAAGTTTAGACTAAGCTGGTTGAGGCAACAAATGGGTTTGGTTGGTCAAGAGCCAATTCTTTTCAATGAAAGCATTAGGTCCAACATAGCATATGGCAAAGAAGGAGGTGCAACCGAGGAAGAGATAATTGCAGCAGCACAAGCAGCCAATGCACACAAGTTCATAAGTTCTCTACCAAATGGTTATGAAACATCTGTTGGGGAAAGAGGCACACAATTATCAGGAGGACAAAAACAACGTATAGCAATCGCAAGAGCCATGCTTAAAGACCCGAAAATCCTTTTGCTTGATGAGGCAACTAGTGCGCTTGATGCCGAGTCGGAGCGTATAGTTCAAGAGGCTATAGAGAAAGTGAGTGAGAATAGAACTACAGTTGTTGTAGCTCACCGTCTTGGAACAATTAAAGGGGCTGATATTATAGCAGTAGTGAAAAATGGTGTGATTGCTGAGAAGGGAAGACATGAAGTGTTGGTTAAGATTGATGGTGGAGTTTATGCTTCATTGGTAGCTCTCCATATGACTGCATCATAG 3795 0.4053 MAEDEGHKANKVNEKVHFYKLFTFADSLDSTLMTIGVISAIGNGLSQPLMTLIFGKLINAFGTTDQSNIVKEVSKVLLFFVYLAVWAGIASFLQVSCWMVTGERQAARIRSLYLKTILKQDIAFFDTETNTGEVIGRMSGDTILIQDAMGEKVGKFLQLLSSFIGGFMIAFTKGWQLTIVLLACIPCLVIVGGIMSMMMAKMSSRGQTAYAEAGNVVEQTLGAIRTVASFTGEKKAIDKYHNKLKVAYATTVQQGLASGLGMGLLLLIVFSTYSLAMWYGSKLIIEKGYNGGDVFNIIVSVNSGGMALGQTTPCLNAFAAGQAAAYKMFETIKRKPTIDAYDTNGVVLEDIKGDIELKDVHFRYPARPDIQIFSGFSFYIPSGTTAALVGQSGSGKSTIISLLERFYDPDSGEVLIDGVNLKSFQVRWIREQIGLVGQEPVLFAASIKENIAYGKEGATDEEITTAITLANAKKFIDKLPQGIDTMVGGNGTSLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALEQVMSNRTTVVVAHRLTTIRNANTIAVVHQGKIVEKGTHDELIKDVDGAYSQLIRLQEGAKDNERQHKYEVDKTNNSFNLDSNTHMSRSSPQRTSFVRSISQSSSGRRQSLSLSFGLPYPIGALESTEGDNKDLESNELGNKKSQNVSIKRLAQLNKPEIPVLLLGSIAAAVHGVVLPIFGLLLSSAINTFYKPPEQLRKDSVFWSVLFVSLGIITLVALSVQNYLFGIAGGKLIERIRSLTFQKVVHQEISWFDHPSHSSGAVSARLATDASTVRSLVGDTLALIVQNIATITAGLVIAFSANWILALVILAVSPLLLIQGYIQTKFLKGFSADAKVKYEEASQVANDAVGSIRTIASFCAEPKVMDMYDAKCSGPAKQGVRLGLVSGVGLGVSFFVLYCTNALCFYVGSILVQHGKATFGEVFKVFFALTVTAIGVSQSSALAPDTNKAKDSAASIFEILDTKPAIDSSSNDGMTLEIVKGDIELEHVSFKYPTRPDIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPDSGRVLIDGVDIKKFRLSWLRQQMGLVGQEPILFNESIRSNIAYGKEGGATEEEIIAAAQAANAHKFISSLPNGYETSVGERGTQLSGGQKQRIAIARAMLKDPKILLLDEATSALDAESERIVQEAIEKVSENRTTVVVAHRLGTIKGADIIAVVKNGVIAEKGRHEVLVKIDGGVYASLVALHMTAS* 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0331 1264 Gene3D ABC transporter type 1, transmembrane domain 78 991 IPR036640 GO:0005524|GO:0016021
Lan4g0331 1264 SUPERFAMILY ABC transporter transmembrane region 681 1002 IPR036640 GO:0005524|GO:0016021
Lan4g0331 1264 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 355 591 IPR003439 GO:0005524
Lan4g0331 1264 Pfam ABC transporter transmembrane region 33 301 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g0331 1264 Pfam ABC transporter transmembrane region 700 971 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g0331 1264 CDD ABC_6TM_Pgp_ABCB1_D2_like 689 1004 - -
Lan4g0331 1264 CDD ABC_MTABC3_MDL1_MDL2 355 593 - -
Lan4g0331 1264 SUPERFAMILY ABC transporter transmembrane region 21 339 IPR036640 GO:0005524|GO:0016021
Lan4g0331 1264 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 35 320 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g0331 1264 MobiDBLite consensus disorder prediction 594 610 - -
Lan4g0331 1264 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 11 1261 IPR039421 -
Lan4g0331 1264 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1021 1258 IPR003439 GO:0005524
Lan4g0331 1264 MobiDBLite consensus disorder prediction 594 639 - -
Lan4g0331 1264 CDD ABC_MTABC3_MDL1_MDL2 1021 1257 - -
Lan4g0331 1264 Gene3D - 353 606 IPR027417 -
Lan4g0331 1264 Pfam ABC transporter 375 522 IPR003439 GO:0005524
Lan4g0331 1264 Pfam ABC transporter 1040 1189 IPR003439 GO:0005524
Lan4g0331 1264 MobiDBLite consensus disorder prediction 611 639 - -
Lan4g0331 1264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1009 1259 IPR027417 -
Lan4g0331 1264 SMART AAA_5 382 574 IPR003593 -
Lan4g0331 1264 SMART AAA_5 1048 1241 IPR003593 -
Lan4g0331 1264 ProSitePatterns ABC transporters family signature. 1161 1175 IPR017871 GO:0005524
Lan4g0331 1264 Gene3D - 1012 1263 IPR027417 -
Lan4g0331 1264 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 11 1261 - -
Lan4g0331 1264 CDD ABC_6TM_Pgp_ABCB1_D1_like 33 316 - -
Lan4g0331 1264 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 700 986 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan4g0331 1264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 344 593 IPR027417 -
Lan4g0331 1264 ProSitePatterns ABC transporters family signature. 494 508 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0331 Lan-Chr4 5438787 5444309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0331 16 1260 Calmodulin-binding Proteins AT2G36910 45.433 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0331 K05658 - gmx:100792531 1996.86