Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0328 ATGGCAGTTGAAGATACCCAAAAATCAACCATCACCGATGAACAAATCACCACAAACCCTAACAACGTCAATGATCACAATGATCTTGAGGAAGGAGAGATCCTCGACGACGCCGACGATTCCTCCGCCACGTCGAAGACTCACTCCGCCGCCGTGGCCCGTAACCCGCTGGAGAATTCTTGGACATTCTGGTTCGATAGCCCTGTCGCAAAGTCCAAACAAGCCGCTTGGGGAAGCTCTATTCGAAGCCTTTATACCTTCTCCACCGTTGAGGAGTTTTGGGGTGTATACAATTACATACATCATCCAAGCAAGTTGACTGTGGGAGCAGACTTCTATTGTTTCAAGGATAAGATTGAGCCTAAATGGGAGGACCCCATTTGCGCTAATGGGGGAAAATGGTCTGTGTCCTTTTCTCGGGGGAAATCTGATATTAGTTGGCTATATACGTTGTTGGCAATGATTGGAGAGCAATTTGATCATGGAGATGAAATTTGTGGAGCGGTCGTCAATGTGCGTGGTAAGCAGGATAAAATCTCTATTTGGACTAAGAACGCTTCCAATGAAGCTGCTCAGATGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTATAATGAGTCCTTGGGCTTTATTTTTCATGAGGATGCAAAGAAGCATGACAGATCTGCTAAAATTAGATATCTCATATGA 693 0.4488 MAVEDTQKSTITDEQITTNPNNVNDHNDLEEGEILDDADDSSATSKTHSAAVARNPLENSWTFWFDSPVAKSKQAAWGSSIRSLYTFSTVEEFWGVYNYIHHPSKLTVGADFYCFKDKIEPKWEDPICANGGKWSVSFSRGKSDISWLYTLLAMIGEQFDHGDEICGAVVNVRGKQDKISIWTKNASNEAAQMSIGKQWKEFLDYNESLGFIFHEDAKKHDRSAKIRYLI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0328 230 MobiDBLite consensus disorder prediction 1 25 - -
Lan4g0328 230 SUPERFAMILY eIF4e-like 37 225 IPR023398 -
Lan4g0328 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 229 - -
Lan4g0328 230 Gene3D RNA Cap, Translation Initiation Factor Eif4e 47 230 IPR023398 -
Lan4g0328 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 229 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lan4g0328 230 MobiDBLite consensus disorder prediction 1 28 - -
Lan4g0328 230 Pfam Eukaryotic initiation factor 4E 56 209 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lan4g0328 230 ProSitePatterns Eukaryotic initiation factor 4E signature. 111 134 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0328 Lan-Chr4 5412500 5414653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0328 1 228 Eukaryotic Initiation Factors Gene Family AT4G18040 65.678 1.12e-107 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0328 K03259 - gmx:100499636 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0328 4 5412500 5414653 Lan16g0511 16 5354574 5356923 LSH