Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0325 ATGGAATCGAAAAACCCTACGAGATTTACGTTAGGGAAGCAATCATCTTTGGCTCCGGAGCGCCATGGTGAAGAATCAGGGTCCCATAAAGATGGTGAGAGCGTGGAAGGTGTTGATTCGGGAGTGAGGTTAATGTATTCTGCAAATGAAGGAGATCTTGATGGTATACGTGAGGTTTTAGAATCTGGTGTTAGTGTGAATTTCAGGGATATTGATTATCGTACGGCTCTTCATATTGCTGCATGTCAGGGTTTAACTGATGTTGTTGCTTTGTTGCTCGAGAAAGGTGCTGAGGTTGACCCTAAAGATCGATGGGGTAGCACGCCACTTGCAGATGCTATATACTATAAAAAGAATGATGTGATCAAACTACTGGAGAAGCATGGAGCAAAGCCTCTGATGGCCCCTATGCACGTAAACCATGCACGTGAAGTCCCAGAATATGAAATCGACCCTAAAGAGCTTGATTTCACCAACAGTGTGGAGATCACAAAGGGAACTTTCTGTAGCGCATTCTGGCGTGGGACAGAGGTTGCAGTAAAAAAGCTTAAGGAGAATGTGCTTACTAATGAGGAGAGAGTGAAATCCTTTAGAGATGAGCTTGCTCTATTCCAGAAGATTCGACATCCAAACGTAGTCCAATTTCTGGGTGCTGTGACCCAGAGTAGTCCAATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTTCGTGCTTTCTTGAAAAGAAAAGGAGCTCTGAAACCATTAACAGCAGTGAGATTTGCACTCGATATTGCTAGGGGTGTGGGTTATTTGCATGAAAATAAGCCATCACCTATTATTCACCGTGATCTTGAGCCTTCTAATATACTGCGCGATGATACCGGGCACCTAAAAGTTGCAGATCTTGGGGTTAGCAAGTTGCTAGCAGTTAAAGAAGACAGGCCTCTAACTTGCCAAGATACTTCTTGCCGCTATGTGGCTCCTGAGGTTTTCAAACAAGAAGAATATGACACGAAAGTGGATGTTTTCTCCTTTGCGCTAATTCTGCAAGAGATGATTGAAGGCTGCCCACCGTTTTCTGCAAAGAAAGATGAGGAGGTTCCTAAGGCATATGCTGCAAAGGAGCGTCCACCTTTTCGAGCTCCATCCAAGCGATATGCCAATGGACTTAAAGAATTGATCGAAGAGTGCTGGAATGAGAATCCAGAAAAGAGACCAACATTTAGGCAAATCATAACAAGGCTGGAATCCATCAACAACACTATTGGTTACAAAAGACGTTGGAAGGTTAGATCATTCAAATGCTTCCAGAATCTGGAAGCCTTATTAAAGAGGGATCATTCGAAACTAAGCAGCCGGGGCAGCTCATCTCGCTCTGCCTCCAGCCGTATATGA 1380 0.4406 MESKNPTRFTLGKQSSLAPERHGEESGSHKDGESVEGVDSGVRLMYSANEGDLDGIREVLESGVSVNFRDIDYRTALHIAACQGLTDVVALLLEKGAEVDPKDRWGSTPLADAIYYKKNDVIKLLEKHGAKPLMAPMHVNHAREVPEYEIDPKELDFTNSVEITKGTFCSAFWRGTEVAVKKLKENVLTNEERVKSFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPLTAVRFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDTGHLKVADLGVSKLLAVKEDRPLTCQDTSCRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFSAKKDEEVPKAYAAKERPPFRAPSKRYANGLKELIEECWNENPEKRPTFRQIITRLESINNTIGYKRRWKVRSFKCFQNLEALLKRDHSKLSSRGSSSRSASSRI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0325 459 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 441 - -
Lan4g0325 459 CDD STKc_MAP3K-like 163 410 - -
Lan4g0325 459 Gene3D Phosphorylase Kinase; domain 1 149 232 - -
Lan4g0325 459 PRINTS Tyrosine kinase catalytic domain signature 229 242 IPR001245 GO:0004672|GO:0006468
Lan4g0325 459 PRINTS Tyrosine kinase catalytic domain signature 268 286 IPR001245 GO:0004672|GO:0006468
Lan4g0325 459 PRINTS Tyrosine kinase catalytic domain signature 381 403 IPR001245 GO:0004672|GO:0006468
Lan4g0325 459 Gene3D Transferase(Phosphotransferase) domain 1 233 455 - -
Lan4g0325 459 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 441 - -
Lan4g0325 459 PIRSF ILK 1 432 - -
Lan4g0325 459 MobiDBLite consensus disorder prediction 18 36 - -
Lan4g0325 459 SUPERFAMILY Protein kinase-like (PK-like) 161 412 IPR011009 -
Lan4g0325 459 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
Lan4g0325 459 SMART ANK_2a 39 68 IPR002110 GO:0005515
Lan4g0325 459 SMART ANK_2a 105 134 IPR002110 GO:0005515
Lan4g0325 459 SMART ANK_2a 72 101 IPR002110 GO:0005515
Lan4g0325 459 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
Lan4g0325 459 Gene3D - 11 148 IPR036770 -
Lan4g0325 459 ProSiteProfiles Protein kinase domain profile. 157 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0325 459 Pfam Ankyrin repeats (3 copies) 44 132 IPR002110 GO:0005515
Lan4g0325 459 MobiDBLite consensus disorder prediction 1 36 - -
Lan4g0325 459 Coils Coil 180 200 - -
Lan4g0325 459 SUPERFAMILY Ankyrin repeat 43 134 IPR036770 -
Lan4g0325 459 Pfam Protein tyrosine and serine/threonine kinase 171 410 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0325 Lan-Chr4 5331450 5337488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0325 8 431 MAP Kinase Kinase Kinase AT4G18950 69.718 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lan4g0325 PK_Tyr_Ser-Thr 1.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0325 - - gmx:100790126 788.489