Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0324 ATGACAAGCAATGAAGAAAACAAAGCCATAGGCATTGACCTAGGCACAACCAACACTTGTGTGGCTGTGTGGCAACACAACCATGTTGAGATCATTCCAAATGACCAAGGTCACCGCACCACCCCTTCTATAGTCTCTTTCACCAATGCCCAAAGGTTAGTTGGTGATGCAGCAAGAAACCAAGTAACCATGAACCCACACAACACCATTTTCGATGTGAAACGTTTGATTGGTCTTCGGTTCCAAGACCAATCAGTTCAACAAGACATGAAGCTGTGGCCATTTAAGGTTGTCCCTTCTGGACCCAACAAAGAGAAGCCCGTGATTGTTGTAAGTTATAAAGGTGAAGAGAAACAAATTTCAGGTGAAGAGATATCTTCTATGGTACTGTCTAAGATGAAAGAGGTTGCAGAACAATATCTGGGTCATGCAGTGAAATGTGCTGTCATCACTGTCCCTGCTTACTTCAACAACTCACAGAGACAAGCCACTAAGGATGCAGGGGTCATTGCAGGCTTCAACGTGTTGAGGATCATCAACGAGCCCACTGCAGCTGCTATTGCTTATGGGTTAGACAAGAAAAGTTGCAGAAAAGGTGAACAGAACGTGTTGGTGTTTGATCTTGGTGGTGGTACTTTTGATGTTTCCTTGGTTACCATTGATGAAGGCATGTTTAAGGTTAAGGCCACTTTAGGAGATACCCATTTAGGTGGTGTAGACTTTGTTAACAAAATGGTTCATCATTTTGTTAATGTATTTAACATGAAGCACAAGATAGATATTAGTGGAAATGCTAGAGCTCTTGGAAAGTTAAGGTCAGCTTGTGAGAAAGCTAAGAGGCTTCTTTCTTCAACTTCACAAGCCATCATTGAGATTGATTCTTTAGCTGGAGATATTGATCTACATGCTCTTGTTACAAGAGCTGCTTTTGAGGAGTTGAACAAAGATTTGTTTGCAAAGTGTATGGAGATTGTGGAGAAGTGTTTGGTTGAGGCTAATGTTCATAAAAGCCAAGTGCATGAGTATGTTCTTGTTGGTGGATCAACTAGAATTCCAAAAGTTCAGCAACTTTTGAAGGACTTTTTCAATGTCAATGGTAAAGAACTTTGCAAGAGCATCAACCCTGATGAGGCTGTCGCGTACGGCGCGGCTGTGCAGGCTGCTATTTTGAGTGGTGAAGGAGACAAGAAATTGGATGATTTGTTGCTGCTTGATGTAATGCCACTTAGTGTTGGTGTTGAGAGTGATGGGGGTTTCATGTCTGTGGTGATTCCGAAGAATACAATAATTCCAACCAAGAAGAAGAGGGTTTTTTCTACCAGCACTGATAATCAGTCTAGCGTGTTGGTCAAGGTATATGAAGGAGATCAAGCTATGACAGAGGATAACATCTTTCTTGGAAAGTTTAAGCTCTCTGGCTTCCCCTTGGCACCGAGGGGAGTCCCAGAGATCGATGTTAGTTTCGATATCGATGTTGATGGTATTCTTGAGGTAACTGCAGAGGATAAGACCAAGAAGTCGAAGTCGAAGATCACTATCACTAACAAGAAGGGGAGGTTGAGCCCGGAGGAGATTAGGAGAATGGTGAGAGATGGAAAGATGCATAAGAAAGAGGATGAGGAGTTTATGAAGAAGGTTAATGCAAAGAACTTGCTTGAGAAATATGCTTATGAAATGAGGGGTAAGTTAAAGAAGCTTGAGGAGGAAGTGGAGGAGACCATAGAATGGATTGATACAAACCAGTTGGCTGAAGCTGATGAATTTGAGTACAAGAAACAGGAGCTGGAAAGGGATTTGCAGCTTCTGTAA 1809 0.4223 MTSNEENKAIGIDLGTTNTCVAVWQHNHVEIIPNDQGHRTTPSIVSFTNAQRLVGDAARNQVTMNPHNTIFDVKRLIGLRFQDQSVQQDMKLWPFKVVPSGPNKEKPVIVVSYKGEEKQISGEEISSMVLSKMKEVAEQYLGHAVKCAVITVPAYFNNSQRQATKDAGVIAGFNVLRIINEPTAAAIAYGLDKKSCRKGEQNVLVFDLGGGTFDVSLVTIDEGMFKVKATLGDTHLGGVDFVNKMVHHFVNVFNMKHKIDISGNARALGKLRSACEKAKRLLSSTSQAIIEIDSLAGDIDLHALVTRAAFEELNKDLFAKCMEIVEKCLVEANVHKSQVHEYVLVGGSTRIPKVQQLLKDFFNVNGKELCKSINPDEAVAYGAAVQAAILSGEGDKKLDDLLLLDVMPLSVGVESDGGFMSVVIPKNTIIPTKKKRVFSTSTDNQSSVLVKVYEGDQAMTEDNIFLGKFKLSGFPLAPRGVPEIDVSFDIDVDGILEVTAEDKTKKSKSKITITNKKGRLSPEEIRRMVRDGKMHKKEDEEFMKKVNAKNLLEKYAYEMRGKLKKLEEEVEETIEWIDTNQLAEADEFEYKKQELERDLQLL* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0324 602 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Lan4g0324 602 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Lan4g0324 602 Pfam Hsp70 protein 9 596 IPR013126 GO:0005524|GO:0140662
Lan4g0324 602 PRINTS 70kDa heat shock protein signature 8 21 - -
Lan4g0324 602 PRINTS 70kDa heat shock protein signature 36 48 - -
Lan4g0324 602 PRINTS 70kDa heat shock protein signature 58 66 - -
Lan4g0324 602 PRINTS 70kDa heat shock protein signature 148 168 - -
Lan4g0324 602 PRINTS 70kDa heat shock protein signature 211 221 - -
Lan4g0324 602 PRINTS 70kDa heat shock protein signature 339 355 - -
Lan4g0324 602 PRINTS 70kDa heat shock protein signature 373 393 - -
Lan4g0324 602 PRINTS 70kDa heat shock protein signature 400 419 - -
Lan4g0324 602 PRINTS 70kDa heat shock protein signature 481 497 - -
Lan4g0324 602 Gene3D - 10 387 - -
Lan4g0324 602 Coils Coil 585 602 - -
Lan4g0324 602 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 553 IPR029047 -
Lan4g0324 602 Gene3D - 194 370 - -
Lan4g0324 602 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 1 596 - -
Lan4g0324 602 SUPERFAMILY Actin-like ATPase domain 198 392 IPR043129 -
Lan4g0324 602 Gene3D Actin; Chain A, domain 4 238 320 - -
Lan4g0324 602 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lan4g0324 602 PANTHER HEAT SHOCK PROTEIN 70KDA 1 596 IPR013126 GO:0005524|GO:0140662
Lan4g0324 602 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 388 574 IPR029047 -
Lan4g0324 602 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 548 597 IPR029048 -
Lan4g0324 602 Gene3D - 71 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0324 Lan-Chr4 5323581 5326460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0324 1 596 Calmodulin-binding Proteins AT3G12580 67.869 0.0 837