Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0320 ATGGCTGATAATTCACCAATCAATGGAAACAATGACAACGTGGTTGTCTCTATTCCTATTTGGCAGAAGTTTTTAGCGGAGGTGTTGGGCACGTACTTCATGATATTTGCAGGATGTGGGGCTGTGGTGGTAAACCTTGATAACGAGAAGGTTATAACACATCCTGGGATTTCAGTTGTTTGGGGACTTGTTGTTATGGTTTTGGCTTACACTCTTGGTCATATATCTGGTGCTCATTTCAACCCTGCTGTTACCATTGCTCATGCTTCCATCAGAAGGTTTCCTCTCAAGGAGGTACCACCTTATATTGTAGCTCAAATGATTGGGTCATTACTTGCAAGTGGAACACTTAGACTTATATTTAATGGTAGGAAAAACCAGTTTATAGGTACACTTCCAGGTGGGTCTGACTTGCAAGCTTTTGTGGTTGAGTTCATAATCACTTTCTACCTCATGTTTGTCATTTCTGGTGTTGCCACTGATAACAGAGCGATTGGTGAGTTGGCTGGACTTGCAGTTGGGTCAACAGTATGTCTGAATGTGATGTTTGCCGGCCCGATCACTGGAGCATCAATGAACCCAGCAAGAAGCTTAGGCCCTGCCATTATACACAATGAATACAGAGGAATATGGATTTATATAGTGGCACCATTTTTGGGAGCTGTGGCAGGAACATGGGTCTACCATTTCATTAGGTACACTAACAAGCCAGTGCGTGAGATCACAGAAAGTGCATCTTTCGTTAAGGGACAACGTGGAACCGTGTGA 768 0.4336 MADNSPINGNNDNVVVSIPIWQKFLAEVLGTYFMIFAGCGAVVVNLDNEKVITHPGISVVWGLVVMVLAYTLGHISGAHFNPAVTIAHASIRRFPLKEVPPYIVAQMIGSLLASGTLRLIFNGRKNQFIGTLPGGSDLQAFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVCLNVMFAGPITGASMNPARSLGPAIIHNEYRGIWIYIVAPFLGAVAGTWVYHFIRYTNKPVREITESASFVKGQRGTV* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0320 255 PANTHER AQUAPORIN NIP2-1 13 251 IPR034294 -
Lan4g0320 255 CDD MIP 22 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan4g0320 255 ProSitePatterns MIP family signature. 79 87 IPR022357 -
Lan4g0320 255 SUPERFAMILY Aquaporin-like 16 240 IPR023271 -
Lan4g0320 255 TIGRFAM MIP: MIP family channel proteins 26 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan4g0320 255 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan4g0320 255 PRINTS Major intrinsic protein family signature 61 85 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan4g0320 255 PRINTS Major intrinsic protein family signature 98 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan4g0320 255 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan4g0320 255 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan4g0320 255 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan4g0320 255 Gene3D Glycerol uptake facilitator protein. 9 244 IPR023271 -
Lan4g0320 255 Pfam Major intrinsic protein 17 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan4g0320 255 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 13 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0320 Lan-Chr4 5294259 5296931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0320 8 249 Major Intrinsic Protein MIP AT5G37820 60.976 1.36e-102 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0320 K09874 - gmx:100786924 399.053