Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0304 ATGAAGACTTGTGATGAATGGAAGCCTTTTATAGTAATGATAGCAATTGATTTTTCTTTTGCTGCTGTGAATATTCTTCTCAAGAAAGTCCTTGAAGAAGGAATGAACCATTTGGTTTTTATCACATACAGGCTTTCAATTGCTACCATTTTCTTAGCCCCAATTGGCTACTTTTGGGAAAGAAAGGACAGACCAAGGCTCACATTTCGAATTTTATGTTGCCTCTTCTTCAGTGCCATAGTTGGGGCATCAGTGACACAATACTTCTTCCTTCTTGGGATCCAGAACACTTCTGCTACCTTTGCTTGTGCCTTTGTCAATATAGTGCCTGTGGTTACTTTCATAATGGCATTACCATTTGGGTTAGAGACTGTGAACATAAAATGCAATGGTGGAAGAGCAAAGATTCTTGGCACATTGGTGTGTATAGGTGGTGTATTGTTGTTGACACTTTACAAAGGAAAGCCATTGGTTAATTATTCTCAGTATCATCCTTCAACTCCAGTAACCAAGGTAGCTTCTACAAGAAAATGGACCATTGGTGTAGTAGCTTTGATTCTTGGAACACTATTTTTGTCTTCATGGTTTATCTTACAATCAAATATAAGTAAGAGATATCCATGTCAGTATTCAAGCACAGCCATTATGACATTCTTTGGAGCCATTCAATCTGCTGTTATTAGCTTGGCCATTGATCACCACAACTTGTCTATATGGATTCTCAATGGAAAGATACAAATTATTGCTGTTCTGTATTCTGGAATAGTTGGATCAGGCTTGTGCCTTGTGGGCATGTCATGGTGTGTGAAGAAAAGGGGTCCTGTTTTTACTGCAGCATTCAGTCCCCTTGTTCAGATAATTGCAGCCATGATTGATATCCCAATCTTGCATGAGCAGCTTCATCTTGGAAGTGTTGTGGGGTCCATCACGGTGATGGTGGGATTATACATTCTTCTATGGGGTAAAAACAAGGAAATGCAAGATCGTGTGAAAAAGTTAGTCCAGGGAGTTGAAGAAGTCAAGGCACAAGAATCTCAAACACAACACATAGTAATGTCTTGTGATTCTGGGTCTCACTGA 1080 0.3944 MKTCDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFLAPIGYFWERKDRPRLTFRILCCLFFSAIVGASVTQYFFLLGIQNTSATFACAFVNIVPVVTFIMALPFGLETVNIKCNGGRAKILGTLVCIGGVLLLTLYKGKPLVNYSQYHPSTPVTKVASTRKWTIGVVALILGTLFLSSWFILQSNISKRYPCQYSSTAIMTFFGAIQSAVISLAIDHHNLSIWILNGKIQIIAVLYSGIVGSGLCLVGMSWCVKKRGPVFTAAFSPLVQIIAAMIDIPILHEQLHLGSVVGSITVMVGLYILLWGKNKEMQDRVKKLVQGVEEVKAQESQTQHIVMSCDSGSH* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0304 359 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020|GO:0016021
Lan4g0304 359 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
Lan4g0304 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 324 - -
Lan4g0304 359 PANTHER WAT1-RELATED PROTEIN 9 346 IPR030184 GO:0016021|GO:0022857
Lan4g0304 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Lan4g0304 359 Coils Coil 323 343 - -
Lan4g0304 359 PANTHER WAT1-RELATED PROTEIN 9 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0304 Lan-Chr4 5058280 5061847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0304 1 327 Nodulin-like Gene Family AT1G11460 39.091 1.83e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0304 - - gmx:100803670 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1756 1 31937269 31939772 Lan4g0304 4 5058280 5061847 PCT
Lan4g0304 4 5058280 5061847 Lan1g1756 1 31937269 31939772 PCT