Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0299 ATGGCTGAGGATAAGGAGACGCCTACATCTATCATTAATGGAAATGATTCCCTTACTGGTCACATCATCTCTACAACAATTGGAGGCAAAAATGGGGAGCCCAAACAGACTATCAGCTACATGGCAGAACGTGTTGTAGGAACTGGATCATTTGGAATTGTTTTTCAGGCAAAATGCTTGGAAACTGGGGAGGCAGTGGCCATTAAGAAGGTTTTACAGGACCGTAGATATAAAAATCGTGAACTGCAGTTAATGCGTGTGATGAATCACCCAAATGTGGTCTCTCTGAAGCACTGTTTCTTTTCAACTACGAGTACAGATGAACTTTTTCTTAACTTGGTGATGGAATATGTTCCAGAGTCTATGTATCGGGTCATAAAGCACTACAGTAATGCTAATCAAAGAATGCCAATTATCTATGTAAAACTTTACATGTACCAGATTTTTCGGGGTTTGGCTTATATCCACACTGTTCCTGGAGTTTGCCACAGAGATCTGAAGCCTCAAAATATACTGGTTGATCCTCTTACACACCAAGTTAAGCTATGTGATTTTGGAAGTGCAAAAATGCTAGTCAAAGGTGAAGCGAATATATCATACATATGTTCACGGTTCTATCGAGCTCCAGAACTTATATTTGGTGCCACGGAGTATACTACTTCGATTGATATCTGGTCAGCTGGCTGCGTCCTTGCTGAACTGCTTTTGGGCCAGCCATTATTCCCCGGCGAAAGTGCAGTGGATCAGCTTGTACATATTATAAAGGTGCTTGGAACACCCACTCGAGAGGAAGTGCGCTGTATGAATCCCAATTACAATGACTTTAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGATATTCCACAAAAAGATGCCTCCAGAAGCTATTGATCTTGCTTCCCGGCTTTTGCAATACTCTCCGAGTCTTCGATGTTCTGCACTAGAAGCTTGTGCACATCCTTTCTTTGATGAACTCCGAGAACCCAATGCTCGCCTGCCAAATGGTCGTCCATTACCCCCTCTTTTCAACTTCAAACAGGAACTATCCGGAGCATCTCCAGAGCTTGTTAATAAGTTGATACCTGACCATGTGAAGCGGCAAATAGGGCTACAATTTCCTCATCAGGCTGCATCATGA 1143 0.4287 MAEDKETPTSIINGNDSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVMNHPNVVSLKHCFFSTTSTDELFLNLVMEYVPESMYRVIKHYSNANQRMPIIYVKLYMYQIFRGLAYIHTVPGVCHRDLKPQNILVDPLTHQVKLCDFGSAKMLVKGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGESAVDQLVHIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCSALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQIGLQFPHQAAS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0299 380 Gene3D Transferase(Phosphotransferase) domain 1 120 367 - -
Lan4g0299 380 CDD STKc_GSK3 35 327 IPR039192 -
Lan4g0299 380 PANTHER BNAANNG31110D PROTEIN 1 374 - -
Lan4g0299 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Lan4g0299 380 Pfam Protein kinase domain 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0299 380 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 374 - -
Lan4g0299 380 SMART serkin_6 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0299 380 ProSiteProfiles Protein kinase domain profile. 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0299 380 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Lan4g0299 380 SUPERFAMILY Protein kinase-like (PK-like) 39 348 IPR011009 -
Lan4g0299 380 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0299 Lan-Chr4 5003223 5007722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0299 44 362 MAP Kinase Gene Family AT3G59790 35.329 1.64e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lan4g0299 Pkinase 1.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0299 K14502 - gmx:100779909 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0299 4 5003223 5007722 Lan16g1207 16 19741195 19745383 LSH