Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0295 ATGGCGGAAATCGTTTCAAACAGAGTTAACACCACTTCCAAAATCAGCAACAAGAAACAAACATCAAATCTACTACTGGGTCGTTTTGAAATCGGAAAACTCCTCGGTCAAGGAAACTTTGCAAAGGTTTACTATGCAACCAACATAAAAACTGGTGAAGAGGTTGCCATAAAGGTGATAGACAAAGAAAAAATACTGAAGGGTGGTCTTGTGGCGCATATTAAGCGTGAAATCTCTATCATGCACCGTGTGCGCCACCCCAACATTGTGCAACTCTTTGAGGTTATGGCCACAAAGTCAAAGATCTACTTTGTGATGGAATATGTTAGAGGGGGTGAACTTTTCAACAAGGTTTCAAAGGGAAGGTTGAAGGAAGAAGTTGCAAGGAAGTATTTTCAGCAATTGATTTCAGCTGTTGAGTTTTGTCATGCTAGAGGTGTGTACCATAGAGATATTAAACCTGAAAATTTGTTGGTTGATGAAAATGGTAACCTTAAAGTTTCTGATTTTGGACTTAGTGCTGTGTCTGATCAAATTAGACAAGATGAGTTGTTCCACACTTTTTGTGGAACACCTGCTTATGTTGCCCCTGAGGTTTTGAGTAGGAGAGGGTATGATGGTGCAAAAGTTGATATTTGGTCTTGTGGTGTTGTTTTGTTTGTTTTGATGGCAGGGTATTTACCATTCAATGATAAAAACATTATGGCTATGTATAGGAGAATTTATAGAGGTGATTTTAGGTGTCCTAGGTGGTTCTCTCCTCATCTTTCCAAGTTCCTAGCACTACTTCTTGTTACAAACCCTGAAGCTAGGATTGGAATTCCTGAAATCATGGGGAATAAGTGGTTCAAGAAAGGTTTCAAGCAAATTAAGTTTTATGTTGAGGATGATAGGCTTTGTAATGTTGATGATAGTCTTCTGGATAATGAGGATGATGTAGCATCAGTTGTTTCGGATAATTCGGTTTCGGAATCTGATTCTGAGATTGAGAGTAAGAGAAGGAATGGTCCATTGCCAAGACCAGCAAGTTTGAATGCTTTTGACATTATATCATTTTCTAAGGGCTTTGATCTCTCTGGATTGTTTGAGGAAAAAGGGGATGTGGTAAGGTTTGTGACTTCTGTGTCAGTGTCAAAGATTATGTCAAAATTGGAGGAAATTGCTCACTTGTTTAGCTTTAGTGTAAGGAAGAAAGACTATAGGGTGAGCTTGGAGGGTACTAGAGAAAGTGTAAAGGGACCCTTGACCATTGCTGTTGAGATATTCGAATTGACACCTTTATTGGTAGTAGTGGAAGTGAAGAAAAAAGGAGGGGATATAGCGGAGTATGAAAAGTTTTGTACTACTGAGTTGAAACCTGGGCTACAGAATTTGATGGTGGAGGAATATGCCACTTCTTCATATTCTGCTGCACCTACTCAGCCACATCCCCTTCTACGCGTTCGCACCGTACCAGCGCACTTATCTTCGGAGATTGGATCTCCTCACTTCATTCCTTCAGATACTGAATCTCCACACTACATTCCTTCAGATAATGAATCTCCACACTACATGCCTTCAGATAGTGAATCTCCACACTACATGCCTTCAGATAATGAATCTCCACACTACATGCCTTCAGATTCAGAGCCATGA 1635 0.4006 MAEIVSNRVNTTSKISNKKQTSNLLLGRFEIGKLLGQGNFAKVYYATNIKTGEEVAIKVIDKEKILKGGLVAHIKREISIMHRVRHPNIVQLFEVMATKSKIYFVMEYVRGGELFNKVSKGRLKEEVARKYFQQLISAVEFCHARGVYHRDIKPENLLVDENGNLKVSDFGLSAVSDQIRQDELFHTFCGTPAYVAPEVLSRRGYDGAKVDIWSCGVVLFVLMAGYLPFNDKNIMAMYRRIYRGDFRCPRWFSPHLSKFLALLLVTNPEARIGIPEIMGNKWFKKGFKQIKFYVEDDRLCNVDDSLLDNEDDVASVVSDNSVSESDSEIESKRRNGPLPRPASLNAFDIISFSKGFDLSGLFEEKGDVVRFVTSVSVSKIMSKLEEIAHLFSFSVRKKDYRVSLEGTRESVKGPLTIAVEIFELTPLLVVVEVKKKGGDIAEYEKFCTTELKPGLQNLMVEEYATSSYSAAPTQPHPLLRVRTVPAHLSSEIGSPHFIPSDTESPHYIPSDNESPHYMPSDSESPHYMPSDNESPHYMPSDSEP* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0295 544 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 13 461 - -
Lan4g0295 544 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Lan4g0295 544 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0295 544 ProSiteProfiles NAF domain profile. 339 363 IPR018451 GO:0007165
Lan4g0295 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Lan4g0295 544 MobiDBLite consensus disorder prediction 317 337 - -
Lan4g0295 544 Gene3D Transferase(Phosphotransferase) domain 1 19 335 - -
Lan4g0295 544 PANTHER - 13 461 - -
Lan4g0295 544 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0295 544 SUPERFAMILY Protein kinase-like (PK-like) 25 495 IPR011009 -
Lan4g0295 544 MobiDBLite consensus disorder prediction 492 544 - -
Lan4g0295 544 Pfam NAF domain 341 397 IPR004041 GO:0007165
Lan4g0295 544 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0295 544 CDD CIPK_C 345 456 - -
Lan4g0295 544 MobiDBLite consensus disorder prediction 505 544 - -
Lan4g0295 544 Gene3D Kinase associated domain 1, KA1 339 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0295 Lan-Chr4 4968641 4970706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0295 1 503 CBL-interacting serine-threonine protein kinases AT4G18700 69.763 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan4g0295 Pkinase 7.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0295 - - gmx:100790133 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0295 4 4968641 4970706 Lan2g1043 2 21626613 21629373 LSH
Lan4g0295 4 4968641 4970706 Lan16g0534 16 6222990 6225867 LSH
Lan4g0295 4 4968641 4970706 Lan16g1203 16 19702656 19704783 LSH
Lan4g0295 4 4968641 4970706 Lan2g1043 2 21626613 21629373 PCT
Lan2g1043 2 21626613 21629373 Lan4g0295 4 4968641 4970706 PCT