Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0289 ATGCCTGATTTCCCCAATTCCCTAACGCCGCCGGCCACCAATCCCCGCCCCCTCCCCGTGCGCGAGGACTGCTGGACGGAGGAAGCCTCCTCCACCCTCGTCGACGCCTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGTCAAAAGGACTGGCAGGATGTCGCTGACGCCGTTAACGCCCTCCACGCCCACTCTAAGAAAACACACCGTACCGACGTTCAGTGCAAGAACCGCATCGACACCATAAAGAAGAAATACAAGATCGAGAAAGCTAGGGTTGCGTCATCCAACGGCGTCGTTTCGTCCTCTTGGCCTTTCTTCGAACGATTAGATGCTTTGATTGGCCCTAACTTCATTGCTAAAAAATCCACATCATCTCCGTCGCCGTCTCCACCGGTGGCGCTCCCTCTCTTGCCATATCGGAAAACACAATCCTCGGTGGCTGCACCGTTTACCGCTGTCGCGCTGCCGCAGAAGCGGGCCGCTGCAGCAATGGATGATGGTTACTTTAGGAGGAATTATTCTGCGATGGCGGCCGCTGCGGCTGCTGCCGAGGCTGATGAGGAGGAGGAGGAAGAAGATGAAGAGGATGAGGAGGAAGAAGATATGATGGAGGATGAAGGAAGAGGTAGTGAAGTGGAGGAAGGAGAGAGAGATAAGGGGAGAGAAGGAATGAGAAGGTTGGCAAAGGCGATAGAGAGGCTCGGGGAAGTGTATGAGAGAGTGGAAGGGCAGAAACTTAGGTATATGGTGGATTTGGAGAAACAGAGGATGCAGTTTACTAAAGATCTTGAAGTTCAGAGGATGCAGATGTTTATGGACACTCAAGTTCAGTTAGAGAGAATTAAGCGTGGGAAGAGATCTGGTTCTAATGGTGAGATTCAATACTTTCTGTTTTTCTGTTATTTTGTATTTATTTTTCTATGTATCCTTTAA 945 0.5164 MPDFPNSLTPPATNPRPLPVREDCWTEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKNRIDTIKKKYKIEKARVASSNGVVSSSWPFFERLDALIGPNFIAKKSTSSPSPSPPVALPLLPYRKTQSSVAAPFTAVALPQKRAAAAMDDGYFRRNYSAMAAAAAAAEADEEEEEEDEEDEEEEDMMEDEGRGSEVEEGERDKGREGMRRLAKAIERLGEVYERVEGQKLRYMVDLEKQRMQFTKDLEVQRMQMFMDTQVQLERIKRGKRSGSNGEIQYFLFFCYFVFIFLCIL* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0289 314 MobiDBLite consensus disorder prediction 187 213 - -
Lan4g0289 314 Coils Coil 228 248 - -
Lan4g0289 314 Gene3D - 25 91 - -
Lan4g0289 314 MobiDBLite consensus disorder prediction 1 20 - -
Lan4g0289 314 Coils Coil 182 212 - -
Lan4g0289 314 MobiDBLite consensus disorder prediction 183 227 - -
Lan4g0289 314 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR044822 -
Lan4g0289 314 MobiDBLite consensus disorder prediction 1 17 - -
Lan4g0289 314 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 8 294 IPR044823 -
Lan4g0289 314 PANTHER OS05G0560600 PROTEIN 8 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0289 Lan-Chr4 4905808 4907441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0289 21 293 Trihelix Transcription Factor Family AT3G14180 31.389 1.11e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan4g0289 Myb_DNA-bind_4 5.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0289 - - gmx:100785349 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0289 4 4905808 4907441 Lan16g1197 16 19577497 19583352 LSH