Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0288 ATGCCTGATTTCCCCAATTCCCTAACGCCGCCGGCCACCAATCCCCGCCCCCTCCCCGTGCGCGAGGACTGCTGGACGGAGGAAGCCTCCTCCACCCTCGTCGACGCCTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGTCAAAAGGACTGGCAGGATGTCGCTGACGCCGTTAACGCCCTCCACGCCCACTCTAAGAAAACACACCGTACCGACGTTCAGTGCAAGAACCGCATCGACACCATAAAGAAGAAATACAAGATCGAGAAAGCTAGGGTTGCGTCATCCAACGGCGTCGTTTCGTCCTCTTGGCCTTTCTTCGAACGATTAGATGCTTTGATTGGCCCTAACTTCATTGCTAAAAAATCCACATCATCTCCGTCGCCGTCTCCACCGGTGGCGCTCCCTCTCTTGCCATATCGGAAAACACAATCCTCGGTGGCTGCACCGTTTACCGCTGTCGCGCTGCCGCAGAAGCGGGCCGCTGCAGCAATGGATGATGGTTACTTTAGGAGGAATTATTCTGCGATGGCGGCCGCTGCGGCTGCTGCCGAGGCTGATGAGGAGGAGGAGGAAGAAGATGAAGAGGATGAGGAGGAAGAAGATATGATGGAGGATGAAGGAAGAGGTAGTGAAGTGGAGGAAGGAGAGAGAGATAAGGGGAGAGAAGGAATGAGAAGGTTGGCAAAGGCGATAGAGAGGCTCGGGGAAGTGTATGAGAGAGTGGAAGGGCAGAAACTTAGGTATATGGTGGATTTGGAGAAACAGAGGATGCAGTTTACTAAAGATCTTGAAGTTCAGAGGATGCAGATGTTTATGGACACTCAAGTTCAGTTAGAGAGAATTAAGCGTGGGAAGAGATCTGGTTCTAATGATATGTATAGGTAG 897 0.5329 MPDFPNSLTPPATNPRPLPVREDCWTEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKNRIDTIKKKYKIEKARVASSNGVVSSSWPFFERLDALIGPNFIAKKSTSSPSPSPPVALPLLPYRKTQSSVAAPFTAVALPQKRAAAAMDDGYFRRNYSAMAAAAAAAEADEEEEEEDEEDEEEEDMMEDEGRGSEVEEGERDKGREGMRRLAKAIERLGEVYERVEGQKLRYMVDLEKQRMQFTKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMYR* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0288 298 MobiDBLite consensus disorder prediction 187 213 - -
Lan4g0288 298 Coils Coil 228 248 - -
Lan4g0288 298 Gene3D - 25 91 - -
Lan4g0288 298 MobiDBLite consensus disorder prediction 214 228 - -
Lan4g0288 298 MobiDBLite consensus disorder prediction 1 20 - -
Lan4g0288 298 Coils Coil 182 212 - -
Lan4g0288 298 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 8 294 IPR044823 -
Lan4g0288 298 MobiDBLite consensus disorder prediction 183 228 - -
Lan4g0288 298 MobiDBLite consensus disorder prediction 1 17 - -
Lan4g0288 298 PANTHER OS05G0560600 PROTEIN 8 294 - -
Lan4g0288 298 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0288 Lan-Chr4 4897205 4902038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0288 21 297 Trihelix Transcription Factor Family AT3G14180 31.694 7.98e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan4g0288 Myb_DNA-bind_4 4.6e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0288 - - gmx:100785349 419.468