Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0287 ATGACTGGAAAAAAGCTTAACCTCACATACATAGTCAGTGATGCAAAGAGAAAGGTAACATTAAAGAAAAGGAAAAATAGTCTTATAAAGAAGATGGGTGAAATCACCACCCTTTGTGGCATTGAAGCTTGTGCTATAATATCTAGCCATAATGAACTTCAACCAGAGGTTTGGCCCTCCCATTTTGGGGTCCAAAATGTCCTCTCCAAGTTCAAGAGAATGTCCGAAACCGAACGTTACATGAAGATGTTGAATCAAGAGAGTTTCATGAACCAAAGAATCATGAAGGCACAAGAGCAACTGAAAAAACTGAGGAATGAGAATAAGAAGAAAGAAACAACCCTTCTCATGTATCAATGCCTACGTAATGGAAATGTTGATGAAAATATTAAAATGGCTAATATGAATGATCTATCTTGGATGATTGATCAAACCTTGAAAGATATTGACAAAAAAATCACTAAGGGCCAACCCGAAGAAGCTATGAATGGAAAGAAGGGATAA 504 0.3671 MTGKKLNLTYIVSDAKRKVTLKKRKNSLIKKMGEITTLCGIEACAIISSHNELQPEVWPSHFGVQNVLSKFKRMSETERYMKMLNQESFMNQRIMKAQEQLKKLRNENKKKETTLLMYQCLRNGNVDENIKMANMNDLSWMIDQTLKDIDKKITKGQPEEAMNGKKG* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0287 167 SUPERFAMILY SRF-like 4 95 IPR036879 GO:0003677|GO:0046983
Lan4g0287 167 ProSiteProfiles MADS-box domain profile. 1 51 IPR002100 GO:0003677|GO:0046983
Lan4g0287 167 PANTHER MADS BOX PROTEIN 2 160 - -
Lan4g0287 167 Gene3D - 14 120 IPR036879 GO:0003677|GO:0046983
Lan4g0287 167 CDD MADS_SRF_like 2 85 IPR033897 GO:0000981|GO:0000987|GO:0045944
Lan4g0287 167 Coils Coil 87 114 - -
Lan4g0287 167 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 2 160 - -
Lan4g0287 167 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Lan4g0287 167 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 51 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0287 Lan-Chr4 4890349 4890917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0287 1 153 Type I MADS-box Gene Family AT5G48670 48.052 3.48e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Lan4g0287 SRF-TF 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0287 - - lang:109329409 216.853