Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0283 ATGGACACCGCTCAATCCACACACAAACTCCATGAATTTCTGAATCCTAAATCTTACAGTGTTCGTGGTAAGATCATGCTTTCTTCCATCATCATCCTCTTCTTCGTCGTTATCTTAATGCTCCTCCTCCATCTCTACGCTCGCTGGTACCTCCTCCGCACTCGCCGTCGTTTCCTCCGTAACCGTAGCAGCAACCACCTCGTCTTCCACCTCGATTCCAATAACAATCCAACCGCGCGTGGTCTCGACGCGTCCATCATCGCGTTGCTACCGATCTTCAACTATGACCCGAAAATGAATCCGGATAACCCGCCAGATTGCGCGGTTTGTTTGTCTGAGTTTGAAGAAGGTGAAACGGGTCGGGTTTTACCGAAATGCAATCACGCGTTTCATACGGATTGTATTGATATGTGGTTTCACTCTCATTCCACGTGTCCTCTATGCCGTGCCGCGGTGGAGCCCACACAAGAAAGAGGTAAAGATAATCATAATCACGAACCTGATGTTGTTGTTGTTGATTTTTGCGAACCGGAATCCGGTTCGGGTTCCGATGAAAACCGAACCGGTTGTGAAGCTTGTTCGTTAGTGAGAGCGAAACCTTCGTTAACAGTGGATGTGATGATTGAGATTCCTTCGAGTGATGAATCGGGTTTGGTTTGTGACTCGGCTTCTACGTCGTCGTTTAGGTCACCGATGACTCGGGTGTTGTCGTTACTTGGCAGGGAACGGAGAGAAAGCGTTTCGCCGGCGTCGGGTTGTGGTGGTTGTAGCAGCTTCGGTGGTGAGGTGAACGCGGAGCGAGGTGGGGAAGATGAGAATCGGTGA 825 0.4994 MDTAQSTHKLHEFLNPKSYSVRGKIMLSSIIILFFVVILMLLLHLYARWYLLRTRRRFLRNRSSNHLVFHLDSNNNPTARGLDASIIALLPIFNYDPKMNPDNPPDCAVCLSEFEEGETGRVLPKCNHAFHTDCIDMWFHSHSTCPLCRAAVEPTQERGKDNHNHEPDVVVVDFCEPESGSGSDENRTGCEACSLVRAKPSLTVDVMIEIPSSDESGLVCDSASTSSFRSPMTRVLSLLGRERRESVSPASGCGGCSSFGGEVNAERGGEDENR* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0283 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 158 IPR013083 -
Lan4g0283 274 SUPERFAMILY RING/U-box 106 155 - -
Lan4g0283 274 CDD RING-H2_PA-TM-RING 106 149 - -
Lan4g0283 274 PANTHER RING-H2 FINGER PROTEIN ATL64 1 192 - -
Lan4g0283 274 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Lan4g0283 274 MobiDBLite consensus disorder prediction 246 274 - -
Lan4g0283 274 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 1 192 - -
Lan4g0283 274 SMART ring_2 107 148 IPR001841 -
Lan4g0283 274 Pfam Ring finger domain 106 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0283 Lan-Chr4 4854933 4856194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0283 13 271 Rapid Response to Elicitors AT3G16720 46.341 2.65e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0283 - - lja:Lj6g3v1468220.1 205.682