Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0276 ATGGACCCCGATGTTTCCCGTTGGGTCCTCGAATTCCTCCTCCGTAATTCCGTTCCCGATTCCCTCATCGCCAAAACCCTCTCCGCCGTTCCTCTCTCCGGCGCCGATTCCAGCCTCAAGAAAACCCTCCTCCTCCGCACCCTTCGCACCCTCCACTCCAATGCTTCCATCACTGAAACCGCTCTCGAAATCCTCGAACTCATCGAAGAGATCGACTGTAACGACGCCGTTCCTGTCACCGATTCAATGCGCCGCGCCTTCTGCGCCGTTGCGGTCGAGTGCACCGTCAAGTACCTCGCTGCGTGCCCCGATGACGCTGCGGGGAATTACTTTGCCGCCGTGAGGAGGATCTGGCGCGGGAGAGTGACGAGGATGGAGAGTGCCGGTCGCCGGAGCGGGTTGTTCTCCGAGGAATTGGTGCGGTGGAGGGATGATTTGGAGGCCGCGGTATGGGATACTAGGGTTTGTGAGAGACTGGTGCAGTTGAATAGTAGGACTGAGGCGTTTAGTGAGGTGAAGGTGTATTTGAAGGAGGCATGGGAGGGTATCGGTCCGTCGTTTCTTGATTCCGTGGAGGTGATGACAAAGGCGAAGGGTTTTGGCTTTGATGTTGGTGGAGAATCGGTTATGAACAGTGATGGAGGGTTAGAGTTTTTGGCCAATGTTGATGGCACTGATAATGATAATCATAATAATGATGTTGATAGTGATAATGATAATGATAATGGCAATCATAATAATGATGGTCATGGTGCATGTGGTGTGGAGAATGAAAATCAGGGCAATGAAAAGGAATTGGAACAGAGAGTTGGGGCTTCTATTGATTTAAACCATCAATTGCCTGCAGAGAAAGAGAAAGAAATTCAGAAGGGCAATCTTCAGCATAGATTCAAGCACACTGTACTACATAGATGCCATAAGGGAGTTAAACTCACTGGTACTGAGGAAGTGGAACCAGCAAAATCATGGAGCAAATGTGATACTGTTCCTAGTGCTGAAGTTAAAAAAGTTCGAGAATCCCTTAAATCGAGTTCTTTGGAGCTGCAAGCATTGGTTAAGGATCCTCTTGCTGATGCATTGCAAATGTCTGAAGTTGTAAGATCCAATTTGGCAGGGAAAGACATAAATCATGGGCCAAGTATTGGAAACCAGAATGGAGATGTAGATGTACCAGATCCAAATGTTGACCAGAATGGAGATGTACCAGATCCAAATGTTGACCAGAATGGAGATGTACCAGATCCAAATGTTTGCAATAGTATTGTACCTTTTCAACCAAATGATGCTAATCTTGTGAAGAAGCCTTTTGTTCGTTGTAGTAATAATGTTTGTTGTCCCAACTTATTGGAACGGAAAGCTACAGCTCGTACTTATGAGTGGGATGATTCTTTAGATAACTCGCCACAACAGGCACAGCCAAGAAAGAGGAAAAGGAAATGGACTTCATTGGAAGAGGAGACACTAAGGGCCGGTGTAAACAAGTTTGGAGAAGGAAACTGGGCAGCAATCCGAGGTTTTTACAGTGACGTATTTGAAAACAGAAGTGGAGTTGATCTGAAGGACAAGTGGAGAAATATGATGCGGTGA 1587 0.4682 MDPDVSRWVLEFLLRNSVPDSLIAKTLSAVPLSGADSSLKKTLLLRTLRTLHSNASITETALEILELIEEIDCNDAVPVTDSMRRAFCAVAVECTVKYLAACPDDAAGNYFAAVRRIWRGRVTRMESAGRRSGLFSEELVRWRDDLEAAVWDTRVCERLVQLNSRTEAFSEVKVYLKEAWEGIGPSFLDSVEVMTKAKGFGFDVGGESVMNSDGGLEFLANVDGTDNDNHNNDVDSDNDNDNGNHNNDGHGACGVENENQGNEKELEQRVGASIDLNHQLPAEKEKEIQKGNLQHRFKHTVLHRCHKGVKLTGTEEVEPAKSWSKCDTVPSAEVKKVRESLKSSSLELQALVKDPLADALQMSEVVRSNLAGKDINHGPSIGNQNGDVDVPDPNVDQNGDVPDPNVDQNGDVPDPNVCNSIVPFQPNDANLVKKPFVRCSNNVCCPNLLERKATARTYEWDDSLDNSPQQAQPRKRKRKWTSLEEETLRAGVNKFGEGNWAAIRGFYSDVFENRSGVDLKDKWRNMMR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0276 528 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 472 528 IPR017930 -
Lan4g0276 528 Gene3D - 469 528 - -
Lan4g0276 528 MobiDBLite consensus disorder prediction 220 265 - -
Lan4g0276 528 ProSiteProfiles Myb-like domain profile. 472 527 IPR001005 -
Lan4g0276 528 PANTHER MYB TRANSCRIPTION FACTOR 1 528 - -
Lan4g0276 528 PANTHER MYB TRANSCRIPTION FACTOR 1 528 - -
Lan4g0276 528 Pfam Myb-like DNA-binding domain 477 526 IPR001005 -
Lan4g0276 528 CDD SANT_TRF 478 528 - -
Lan4g0276 528 MobiDBLite consensus disorder prediction 372 411 - -
Lan4g0276 528 MobiDBLite consensus disorder prediction 460 479 - -
Lan4g0276 528 MobiDBLite consensus disorder prediction 228 244 - -
Lan4g0276 528 SUPERFAMILY Homeodomain-like 473 527 IPR009057 -
Lan4g0276 528 SMART sant 476 528 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0276 Lan-Chr4 4529874 4533614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0276 480 527 Single Myb Histone (SMH) Gene Family AT1G15720 52.083 1.49e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan4g0276 Myb_DNA-binding 4.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0276 - K11111 lang:109345201 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0276 4 4529874 4533614 Lan16g0545 16 6336944 6340717 LSH